Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0664 | ATGGCTACTGTCATCAAAGAACTCCAGGCTGTACCGGTTACCACATCTGCCGTTCTGGGTGGTTTTTCGTTGTTGATGTTCTTTCTTCTCAGAGGTTTTAACTCTAGAAGAAACAGACGTGTCAGACTTCCTCCGGTTCCCGCGATTCCTGGGCTGCCTTTGTTGGGAAATTTGCTGCAGTTAAAAGAGAAGAAGCCTCATAAGACGTTTGCTCAATGGGCTGAGACTTATGGTCCAATTTATTCTATAAGAACTGGTGCTTCTACTGTGATTGTTCTTAATACTGCAGAAGTTGCCAAAGAGGCTATGGTGACGAGGTATTCTTCCATTTCTCAAAGAAAGCTAAGCAAAGCACTCACGATCTTGACTTCTGATAAATGCATGGTTGCTATGAGTGATTATAATGATTTTCATAAGATGGTGAAGAAATATATTCTGGCTAATGTTTTGGGTGCTGCTGCTCAGAAGAGACATAGACAACATAGAGATACCATGATGGAAAATATTTCAAGCCGATTGTATGCTCATGTGAAGGATTCTCCATTGGAAGCAGTTGATTTTCGAGAAATCTTTGAAGCCGAACTCTTTCGACTTGCGGTGAAGGAATCACTGGGCAAGGATATCGAATCGATATATGTCGATGAGCTTGGTACCACCTTGTATAGAAAAGATCTGTTCAATGTTTTGGTGATTGATCCAATGGAGGGTGCGATTGAGGTTGATTGGAGGGATTTCTTCCCATATCTGAACTGGATTCCCAACAAGAGTTTGGAGGATAAAATCCGGAAGATGTCTTTTCGTAGACGAGCTGTGATGAGCAGCCTCATAAAGGAGCAGAAGAAGCGAATTGAATCAGGAGAGAAAGTGAATTGCTACATCGACTTCTTATTATCGGAAGGAAAAACGCTTGAAGAGGAGCAAATATCAATGCTACTCTGGGAGACGATCATTGAAACCTCAGATACTACTTTGGTTGTAACAGAATGGGCTATGTATGAACTCGCGAAAAATCCTAAACGACAGGAAGATCTCTATCAGCATATACGGAATGTATGCGGATCTGCAAAGCTTACAGAAGAAAACCTATCGCAGCTTCCATATCTGACTGCCGTTTTTCATGAAACTCTTCGAAGGCACAGTCCAGTCCCGGTTGTCCCATTGCGATATGCACACGAAGACACCCAGTTAGGAGGGTATTACATTCCTGCAGGAAGTGAGATTGCCATAAACATTTATGCGTGCAACATGGATAAGGACCACTGGGAAAATCCTGAGGTATGGAATCCAGAGAGGTTTCTCGACCAGAAATACGATCCGATGGATCTGCACAAAACAATGGCCTTTGGAGGAGGGAAGAGGGTATGTGCAGGTGCTCTCAAGGCAATGCTGATAGCTTGCACAACTATAGGTAAGCTGATTCAGGAGTTCGAATGGAAGCTGAGCGATGGGGAGGAGGACAAGGTGGATACTCTTGGCCTCACTGCTCGCAAACTCCTTCCGTTGCATGCAGTCGTAAAACCGAGAGCGTACTAA | 1533 | 43.77 | MATVIKELQAVPVTTSAVLGGFSLLMFFLLRGFNSRRNRRVRLPPVPAIPGLPLLGNLLQLKEKKPHKTFAQWAETYGPIYSIRTGASTVIVLNTAEVAKEAMVTRYSSISQRKLSKALTILTSDKCMVAMSDYNDFHKMVKKYILANVLGAAAQKRHRQHRDTMMENISSRLYAHVKDSPLEAVDFREIFEAELFRLAVKESLGKDIESIYVDELGTTLYRKDLFNVLVIDPMEGAIEVDWRDFFPYLNWIPNKSLEDKIRKMSFRRRAVMSSLIKEQKKRIESGEKVNCYIDFLLSEGKTLEEEQISMLLWETIIETSDTTLVVTEWAMYELAKNPKRQEDLYQHIRNVCGSAKLTEENLSQLPYLTAVFHETLRRHSPVPVVPLRYAHEDTQLGGYYIPAGSEIAINIYACNMDKDHWENPEVWNPERFLDQKYDPMDLHKTMAFGGGKRVCAGALKAMLIACTTIGKLIQEFEWKLSDGEEDKVDTLGLTARKLLPLHAVVKPRAY | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 4048622 | 4050780 | - | evm.model.ptg000002l.995 | HCH12g0664 | 555511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0664 | 510 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0664 | 510 | PRINTS | E-class P450 group I signature | 327 | 353 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | PRINTS | E-class P450 group I signature | 369 | 387 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | PRINTS | E-class P450 group I signature | 98 | 119 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | PRINTS | E-class P450 group I signature | 410 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | Pfam | Cytochrome P450 | 50 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | SUPERFAMILY | Cytochrome P450 | 39 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | CDD | CYP77_89 | 76 | 502 | - | - | |
| HCH12g0664 | 510 | Gene3D | Cytochrome P450 | 29 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0664 | 510 | PANTHER | ENT-KAURENE OXIDASE, CHLOROPLASTIC | 14 | 509 | IPR044225 | GO:0005506(InterPro)|GO:0005783(PANTHER)|GO:0009686(InterPro)|GO:0009686(PANTHER)|GO:0009707(PANTHER)|GO:0010241(PANTHER)|GO:0010241(InterPro)|GO:0016709(PANTHER)|GO:0020037(InterPro)|GO:0052615(InterPro) | |
| HCH12g0664 | 510 | FunFam | Ent-kaurene oxidase 2 | 38 | 510 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0664 | HCH-Chr12:4048622 | HCH9g1264 | HCH-Chr9:36129205 | 2.40E-48 | dispersed | |
| HCH12g0664 | HCH-Chr12:4048622 | HCH8g1432 | HCH-Chr8:48903513 | 1.70E-41 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0664 | K04122 | - | csv:101209283 | 796.964 |