Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0670 ATGGAACCTTCTATCCATTTGATTCTCAATGCCATATTTTTTGCTCTTCTTCCTCTACTTGTATATTACATTGCCTTTGGAAGGGAAAAAAGTTTTGTGGGAAAGAATAGTAGAGCAGCTCCTGAACCTGCTGGTGCATGGCCAATTATTGGCCATCTTCACCTTCTTGGAGGTGGGGATCAGCTTCTGTACCGCACTCTAGGTGTAATGGCTGACAAGTACGGGCCAGCATTTGATATCCGGTTGGGCAGTCGCCGCGCTTTTGTTGTGAGCAGTTGGGAGGTAGCTAAGGATTGCTTCACTGTTAATGACAAGGCACTTGCATCCAGGCCTACCACGGTGGCCGCAAAGCATATGGGATATAACTATGCGGTGTTTGGATTCGCTCCATATAGTCCCTTTTGGCGTGAAATGAGAAAGATTGCGACAATCGAACTTCTTTCGAATCGTCGGCTCGAGATGCTTAAACATGTAAGGACTTCAGAAATTGATATGGGAGTACGGGAGTTGTATCTTCTGTGGACACAAAACAACTTCTCACCTGTGCTTGTGGAACTTAAACGATGGTTAGATGACTTGACACTTAATATGGTTGTTAGAATGGTGGCTGGAAAACGTTATTTTGGTGCCTCGGCTACTTGTGATGATGGAGAAGCAAGACGGTGCCAGAAAGCTATTGCCCAATTTTTTCATCTGATTGGCCTTTTCGTGGTCTCGGATGCACTTCCATTTTTATGGTGGCTGGATTTGCATGGGCATGAGAAAGCAATGAAGAAAACAGCTAAAGAGCTCGATGCAATACTTGAAGGCTGGCTGGACGAGCATCGGCAACAGAGAGCTCGTAGCGGGCGCAAAGCTGATAGTGATAAAGACTTCATTGATGTGATGTTGTCACTTCAAGAAGAAGGGCATCTCTCAAATTTTCAGTATGATGCAAATACCAGCATTAAATCTACTTGCCTGGCACTAATCCTTGGCGGCAGTGACACAACATCCGGAACACTTACATGGGCTATCTCATTGCTTCTCAACAATCATCATGCCTTGAAGAAAGCTCACGAAGAGTTGGATCGACATATCGGTAAAGATCGACAAGTTGATGATGCAGACATAAAAAACCTGGTATATCTTCAGGCTATTATCAAGGAAACCCTTCGTCTGTACCCTGCAGGGCCTCTGTTGGGGCCTCGGGAAGCCTTGGAAGATTGCACCGTAGCAGGCTACGATGTCCCGGCTGGAACACGCTTGGTGGTAAATGTTTGGAAGATCCACAGGGATCCAAATGTGTGGGATGATCCATCTGCCTTTATCCCAGAGAGGTTTCTAACAACTCATGAAAATGTAGATGTTAGGGGACAACAATTTGAACTAATGCCATTTGGTTCTGGGAGAAGGTCATGCCCCGGTGCTTCCTTTGCTCTCCAAGTTCTTCATTTAACTCTTGCACGTCTACTTCATGGATTTGAATTGACGACTCCCTCGAATCGACATGTCGATATGACCGAGAGCCCTGGTTTGACAATTCCAAAGAGAACTCCATTGGAGGTTCTTCTGACTCCTCGCCTCCCGGCAAAGCTTTACACCTACTGA 1590 45.79 MEPSIHLILNAIFFALLPLLVYYIAFGREKSFVGKNSRAAPEPAGAWPIIGHLHLLGGGDQLLYRTLGVMADKYGPAFDIRLGSRRAFVVSSWEVAKDCFTVNDKALASRPTTVAAKHMGYNYAVFGFAPYSPFWREMRKIATIELLSNRRLEMLKHVRTSEIDMGVRELYLLWTQNNFSPVLVELKRWLDDLTLNMVVRMVAGKRYFGASATCDDGEARRCQKAIAQFFHLIGLFVVSDALPFLWWLDLHGHEKAMKKTAKELDAILEGWLDEHRQQRARSGRKADSDKDFIDVMLSLQEEGHLSNFQYDANTSIKSTCLALILGGSDTTSGTLTWAISLLLNNHHALKKAHEELDRHIGKDRQVDDADIKNLVYLQAIIKETLRLYPAGPLLGPREALEDCTVAGYDVPAGTRLVVNVWKIHRDPNVWDDPSAFIPERFLTTHENVDVRGQQFELMPFGSGRRSCPGASFALQVLHLTLARLLHGFELTTPSNRHVDMTESPGLTIPKRTPLEVLLTPRLPAKLYTY 529
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 4095373 4097040 + evm.model.ptg000002l.989 HCH12g0670 555517
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0670 529 SUPERFAMILY Cytochrome P450 41 521 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH12g0670 529 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 CDD CYP82 75 521 - -
HCH12g0670 529 FunFam Cytochrome P450 82C4 31 519 - -
HCH12g0670 529 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 Gene3D Cytochrome P450 28 517 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0670 529 PANTHER CYTOCHROME P450 82C3-RELATED 20 524 IPR050651 -
HCH12g0670 529 Pfam Cytochrome P450 41 510 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0235 HCH-Chr12:1311509 HCH12g0670 HCH-Chr12:4095373 3.20E-157 dispersed
HCH12g0236 HCH-Chr12:1313793 HCH12g0670 HCH-Chr12:4095373 2.00E-154 dispersed
HCH12g0670 HCH-Chr12:4095373 HCH12g0675 HCH-Chr12:4115860 3.70E-161 dispersed
HCH12g0670 HCH-Chr12:4095373 HCH12g0671 HCH-Chr12:4097636 7.00E-160 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0670 K23136 - vvi:100247206 839.336