Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0670 | ATGGAACCTTCTATCCATTTGATTCTCAATGCCATATTTTTTGCTCTTCTTCCTCTACTTGTATATTACATTGCCTTTGGAAGGGAAAAAAGTTTTGTGGGAAAGAATAGTAGAGCAGCTCCTGAACCTGCTGGTGCATGGCCAATTATTGGCCATCTTCACCTTCTTGGAGGTGGGGATCAGCTTCTGTACCGCACTCTAGGTGTAATGGCTGACAAGTACGGGCCAGCATTTGATATCCGGTTGGGCAGTCGCCGCGCTTTTGTTGTGAGCAGTTGGGAGGTAGCTAAGGATTGCTTCACTGTTAATGACAAGGCACTTGCATCCAGGCCTACCACGGTGGCCGCAAAGCATATGGGATATAACTATGCGGTGTTTGGATTCGCTCCATATAGTCCCTTTTGGCGTGAAATGAGAAAGATTGCGACAATCGAACTTCTTTCGAATCGTCGGCTCGAGATGCTTAAACATGTAAGGACTTCAGAAATTGATATGGGAGTACGGGAGTTGTATCTTCTGTGGACACAAAACAACTTCTCACCTGTGCTTGTGGAACTTAAACGATGGTTAGATGACTTGACACTTAATATGGTTGTTAGAATGGTGGCTGGAAAACGTTATTTTGGTGCCTCGGCTACTTGTGATGATGGAGAAGCAAGACGGTGCCAGAAAGCTATTGCCCAATTTTTTCATCTGATTGGCCTTTTCGTGGTCTCGGATGCACTTCCATTTTTATGGTGGCTGGATTTGCATGGGCATGAGAAAGCAATGAAGAAAACAGCTAAAGAGCTCGATGCAATACTTGAAGGCTGGCTGGACGAGCATCGGCAACAGAGAGCTCGTAGCGGGCGCAAAGCTGATAGTGATAAAGACTTCATTGATGTGATGTTGTCACTTCAAGAAGAAGGGCATCTCTCAAATTTTCAGTATGATGCAAATACCAGCATTAAATCTACTTGCCTGGCACTAATCCTTGGCGGCAGTGACACAACATCCGGAACACTTACATGGGCTATCTCATTGCTTCTCAACAATCATCATGCCTTGAAGAAAGCTCACGAAGAGTTGGATCGACATATCGGTAAAGATCGACAAGTTGATGATGCAGACATAAAAAACCTGGTATATCTTCAGGCTATTATCAAGGAAACCCTTCGTCTGTACCCTGCAGGGCCTCTGTTGGGGCCTCGGGAAGCCTTGGAAGATTGCACCGTAGCAGGCTACGATGTCCCGGCTGGAACACGCTTGGTGGTAAATGTTTGGAAGATCCACAGGGATCCAAATGTGTGGGATGATCCATCTGCCTTTATCCCAGAGAGGTTTCTAACAACTCATGAAAATGTAGATGTTAGGGGACAACAATTTGAACTAATGCCATTTGGTTCTGGGAGAAGGTCATGCCCCGGTGCTTCCTTTGCTCTCCAAGTTCTTCATTTAACTCTTGCACGTCTACTTCATGGATTTGAATTGACGACTCCCTCGAATCGACATGTCGATATGACCGAGAGCCCTGGTTTGACAATTCCAAAGAGAACTCCATTGGAGGTTCTTCTGACTCCTCGCCTCCCGGCAAAGCTTTACACCTACTGA | 1590 | 45.79 | MEPSIHLILNAIFFALLPLLVYYIAFGREKSFVGKNSRAAPEPAGAWPIIGHLHLLGGGDQLLYRTLGVMADKYGPAFDIRLGSRRAFVVSSWEVAKDCFTVNDKALASRPTTVAAKHMGYNYAVFGFAPYSPFWREMRKIATIELLSNRRLEMLKHVRTSEIDMGVRELYLLWTQNNFSPVLVELKRWLDDLTLNMVVRMVAGKRYFGASATCDDGEARRCQKAIAQFFHLIGLFVVSDALPFLWWLDLHGHEKAMKKTAKELDAILEGWLDEHRQQRARSGRKADSDKDFIDVMLSLQEEGHLSNFQYDANTSIKSTCLALILGGSDTTSGTLTWAISLLLNNHHALKKAHEELDRHIGKDRQVDDADIKNLVYLQAIIKETLRLYPAGPLLGPREALEDCTVAGYDVPAGTRLVVNVWKIHRDPNVWDDPSAFIPERFLTTHENVDVRGQQFELMPFGSGRRSCPGASFALQVLHLTLARLLHGFELTTPSNRHVDMTESPGLTIPKRTPLEVLLTPRLPAKLYTY | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 4095373 | 4097040 | + | evm.model.ptg000002l.989 | HCH12g0670 | 555517 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0670 | 529 | SUPERFAMILY | Cytochrome P450 | 41 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0670 | 529 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | CDD | CYP82 | 75 | 521 | - | - | |
| HCH12g0670 | 529 | FunFam | Cytochrome P450 82C4 | 31 | 519 | - | - | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 95 | 116 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PRINTS | E-class P450 group I signature | 378 | 396 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | Gene3D | Cytochrome P450 | 28 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0670 | 529 | PANTHER | CYTOCHROME P450 82C3-RELATED | 20 | 524 | IPR050651 | - | |
| HCH12g0670 | 529 | Pfam | Cytochrome P450 | 41 | 510 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0235 | HCH-Chr12:1311509 | HCH12g0670 | HCH-Chr12:4095373 | 3.20E-157 | dispersed | |
| HCH12g0236 | HCH-Chr12:1313793 | HCH12g0670 | HCH-Chr12:4095373 | 2.00E-154 | dispersed | |
| HCH12g0670 | HCH-Chr12:4095373 | HCH12g0675 | HCH-Chr12:4115860 | 3.70E-161 | dispersed | |
| HCH12g0670 | HCH-Chr12:4095373 | HCH12g0671 | HCH-Chr12:4097636 | 7.00E-160 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0670 | K23136 | - | vvi:100247206 | 839.336 |