Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0689 ATGGCGTTTTCTTCGGTGCCTGAAAACCTAACCAGAGACCAATACGTTTACCTAGCCAAGCTCGCCGAGCAAGCTGAGCGCTATGAGGAAATGGTTCAGTTCATGCAGAAGCTCGTATTGAGCTCTACTCCGGCGTCGGAGCTCACCGTCGAAGAGCGTAATCTTATGTCCGTCGCTTACAAGAACGTAATCGGCTCTCTCCGCGCGGCCTGGCGTATCGTTTCGTCGATCGAACAGAAGGAAGAGGGAAGGAAGAACGAGGAGCATGTGGTTCTCGTTAAGGAGTATAGATCTAAAGTTGAATCGGAGCTTTCTGAGGTTTGCGCTAGTATTTTGAAGCTTTTGGATTCTAATTTGATCCCTTCGGCTTCGTCTGGAGAGTCTAGAGTGTTTTATTTGAAGATGAAGGGAGATTATCATCGGTATTTGGCGGAGTTTAAGATCGGTGAAGAGAGGAAGTCCGCTGCTGAGGATACGATGATTGCTTATAAGGCTGCTCAGGACATTGCAATAGCTGATCTGGCACCAACGCATCCAATAAGGCTGGGGCTGGCACTAAATTTCTCTGTCTTTTACTTTGAGATTCTGAATCAGTCTGACAAAGCATGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCTGAACTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTTATCATGCAACTGTTGAGGGACAATCTCACTCTCTGGACTTCCGATATGCAGGACCAGTTAGATGAGCCATAG 762 46.85 MAFSSVPENLTRDQYVYLAKLAEQAERYEEMVQFMQKLVLSSTPASELTVEERNLMSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKEYRSKVESELSEVCASILKLLDSNLIPSASSGESRVFYLKMKGDYHRYLAEFKIGEERKSAAEDTMIAYKAAQDIAIADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDQLDEP 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4217141 4219722 - evm.model.ptg000002l.970 HCH12g0689 555536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0689 253 Gene3D - 2 252 IPR036815 -
HCH12g0689 253 SMART 1433_4 12 252 IPR023410 -
HCH12g0689 253 PANTHER 14-3-3 PROTEIN 12 248 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
HCH12g0689 253 Pfam 14-3-3 protein 18 243 IPR023410 -
HCH12g0689 253 SUPERFAMILY 14-3-3 protein 11 245 IPR036815 -
HCH12g0689 253 FunFam 14-3-3 protein epsilon 9 253 - -
HCH12g0689 253 PIRSF 14-3-3 7 252 IPR000308 -
HCH12g0689 253 PRINTS 14-3-3 protein zeta signature 47 76 IPR000308 -
HCH12g0689 253 PRINTS 14-3-3 protein zeta signature 162 188 IPR000308 -
HCH12g0689 253 PRINTS 14-3-3 protein zeta signature 96 120 IPR000308 -
HCH12g0689 253 PRINTS 14-3-3 protein zeta signature 216 245 IPR000308 -
HCH12g0689 253 PRINTS 14-3-3 protein zeta signature 127 149 IPR000308 -
HCH12g0689 253 PRINTS 14-3-3 protein zeta signature 189 215 IPR000308 -
HCH12g0689 253 ProSitePatterns 14-3-3 proteins signature 2. 225 244 IPR023409 -
HCH12g0689 253 Coils Coil 18 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0689 HCH-Chr12:4217141 HCH9g0347 HCH-Chr9:2161383 4.90E-103 dispersed
HCH12g0689 HCH-Chr12:4217141 HCH4g0290 HCH-Chr4:1864433 2.70E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0689 K06630 - csv:101206352 461.07