Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0842 ATGCAGTTATATCATCATCCATTCTCTTTGGACAGCCAGAAGGTGAGACTTGCTTTGGAAGAGCAAGGCATTGATTATACATCATATCATGTCAATCCTATCACAGGAAAGAACATGGACTCCTCGTTCTTCAAGATGAATCCGAGTGCGAAGCTTCCTGTTTTTCAAAATGGTTCCCACATCATTTTTGACACCATTGAGATAATTCAGTATATCGAGAGAATTGCAGTTGTCTCCTCAGGGACTGATGAAGTAATGCCAAGTGGTAGAGAAGTTGATTGGATGCACAAGATACAAGAATGGAATCCTAAATTTTTTACTCTTTCTCATGTCCCCGAGAAGTATCGCCTCACGGTTACCAAATTTATAAGACGGGTGGTGATTGCTCGGATGGCTGAAACTCCCGAAATGGCAGCTGCTTACCATCATAAGCTGAGAGAAGCATACGAGACAGAAGACAAACTGAAAAATAAAACTATTGCCAAACAAAACACTGAACACCTTATCAGACTCCTTGATGAAATCGAATCGAAACTAGGTGAAACTGCATTCTTAGCAGGGGATGAGTTTACCATGGCAGATGCAATGTTCATACCGGTGCTGACTCGTCTGGCGCTATTAAATTTGGCAGACGAGTATATCGGGAGCCGACCAAATATTGCAGAGTATTGGATGTTGGTGCAGCAAAGGCCTAGCTATAAGAAGGTAATTGGAAAGTATTTTAATGGCTGGAGAAAGCACAAAACATTAATGAAAACTTGGTTTTTTGTTCATATCAGAACCTTACTGAGGAGATATTGA 801 40.82 MQLYHHPFSLDSQKVRLALEEQGIDYTSYHVNPITGKNMDSSFFKMNPSAKLPVFQNGSHIIFDTIEIIQYIERIAVVSSGTDEVMPSGREVDWMHKIQEWNPKFFTLSHVPEKYRLTVTKFIRRVVIARMAETPEMAAAYHHKLREAYETEDKLKNKTIAKQNTEHLIRLLDEIESKLGETAFLAGDEFTMADAMFIPVLTRLALLNLADEYIGSRPNIAEYWMLVQQRPSYKKVIGKYFNGWRKHKTLMKTWFFVHIRTLLRRY 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5509281 5510412 - evm.model.ptg000002l.817 HCH12g0842 555689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0842 266 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
HCH12g0842 266 SFLD Main (cytGST) 1 230 - -
HCH12g0842 266 CDD GST_C_family 139 224 - -
HCH12g0842 266 Pfam Glutathione S-transferase, C-terminal domain 165 223 - -
HCH12g0842 266 Gene3D Glutaredoxin 1 75 - -
HCH12g0842 266 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 266 IPR044617 GO:0004364(InterPro)
HCH12g0842 266 CDD GST_N_family 1 73 - -
HCH12g0842 266 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
HCH12g0842 266 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 117 255 IPR010987 -
HCH12g0842 266 SUPERFAMILY GST C-terminal domain-like 136 240 IPR036282 -
HCH12g0842 266 SFLD Glutathione Transferase (cytosolic) 1 230 IPR040079 -
HCH12g0842 266 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
HCH12g0842 266 Gene3D - 129 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0842 HCH-Chr12:5509281 HCH4g0822 HCH-Chr4:5284872 5.80E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0842 K22077 - csv:101222476 482.256