Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0935 ATGTCAAAACTCCGGCGAGTTCTTCCATTCCTCTGTCTCTCCCTTTTACTCCTCCCTTCTCTGATTTTCGCACAGTGCAATTGCACGAATGAAGAAGAAGGAGAAGAAGTCCGCGACAAAGGGCGAGCCATGAAATACAAAATCGTCGGCATAGCTTCAATTCTGATCGCGGGTATTATCGGAATGTGCATTCCCATGCTCGGAAAAACATTCCCGGCTTTAAGTCCTGAGAAAGAGATTTTCTTTATCATTAAAGCTTTCGCCGCCGGCGTTATTTTATCAACTGGGTTTATTCACGTTCTTCCCGATGCTTACGAGAGCCTCACGTCACCGCACTTGAATGAAAATCCGTGGTCCAAGTTTCCGTTTACTGGATTGGTGGCGATGGCGGCGGCGATCGCGACGTTGATGGTGGATGCTGGTGCGAGTTCTTATTATAATAGGCTTCATTTGAAAAGGGCTCAGCCGGTAGAAAATGGAGATCAAGAGAGGGACGGCGCCGGCGCCGGCGAGGGGCATGATGGTCATGTTCATGTTCATACTCATGCAACGCATGGCCACGCTCATGGGTCGATGGAGATTTCTGGGACTAGTTCTGATATTCTTCGACATCGAGTTGTTTCTCAGGTACTGGAATTGGGGATTGTGGTGCATTCTGTAATTATAGGAATTGCATTGGGTGCTTCTGAAACTCCAAAAACCATAAGACCTCTTGTAGCAGCCATTACTTTTCATCAATTATTTGAAGGCATGGGCCTTGGAGGATGTATCACTCAGGCAAAATTCAAGAACAAGGCAACTCTAATAATGACATTGTTCTTCTGTCTAACGACACCAATAGGGATAGTAATAGGGATTGGAATGACAAATATATACGATGAAGACAGCCCGAAAGCTCTAATTGTTGAAGGGATATTAAACGCAGCATCGGCGGGGATCTTAATCTATATGGCTCTTGTTGATCTTCTGGCTGCTGATTTCATGAATCCCAAAATGCAAAGTAATGCAAAGCTTCAAATTTTGGCTAATATTGCTCTTCTTGTTGGAGCTGCTTTGATGTCTTTATTAGCTATTTGGGCTTGA 1083 44.69 MSKLRRVLPFLCLSLLLLPSLIFAQCNCTNEEEGEEVRDKGRAMKYKIVGIASILIAGIIGMCIPMLGKTFPALSPEKEIFFIIKAFAAGVILSTGFIHVLPDAYESLTSPHLNENPWSKFPFTGLVAMAAAIATLMVDAGASSYYNRLHLKRAQPVENGDQERDGAGAGEGHDGHVHVHTHATHGHAHGSMEISGTSSDILRHRVVSQVLELGIVVHSVIIGIALGASETPKTIRPLVAAITFHQLFEGMGLGGCITQAKFKNKATLIMTLFFCLTTPIGIVIGIGMTNIYDEDSPKALIVEGILNAASAGILIYMALVDLLAADFMNPKMQSNAKLQILANIALLVGAALMSLLAIWA 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6364731 6367070 + evm.model.ptg000002l.724 HCH12g0935 555782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0935 360 MobiDBLite consensus disorder prediction 156 181 - -
HCH12g0935 360 MobiDBLite consensus disorder prediction 156 190 - -
HCH12g0935 360 PANTHER ZINC/IRON TRANSPORTER 43 359 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
HCH12g0935 360 Pfam ZIP Zinc transporter 45 357 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
HCH12g0935 360 NCBIfam ZIP zinc/iron transport family 31 360 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0935 HCH-Chr12:6364731 HCH7g0020 HCH-Chr7:169414 5.20E-98 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0935 K14709 - csv:101215851 496.123