Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0959 | ATGGAAGTAACCGCTTCGATTTCAGTTTCCGTTCAATTGGGTTTGGTATTGCTTCTAATAATATGGGGATGGAAAGTTATAAACTGGATTTGGGTGAGGCCAAAGAGGCTTGAAAAGTACTTGAGAAATCAAGGCCTCGCCGGAAATTCTTATCGTCTTCTCTTTGGAGATTTTAAGGATATAGCAACTGCTATGCGCCGAGCTAAATCACTTCCGATGGATTTCTCTCATGATATTGCTCCACGCGTCACCCCTTCCTCTCATATAACCATTCACAAATACGGTAAGGATTCTTTTACATGGCTTGGCACAACTCCAAGAGTTTACATAACAGAGCCTGAACAATTGAAGTCTGTCTTCTCTCTTACAAATGACGTTCGTAAGATGTCTTCGTTTGCCGTTGCAAGGAGATTGGGAAGGGGACTCGTCTCCCTCGAGGGAAGTAAATGGGCTAGACATAGAAAGATCATCAACCCTGCATTTCATTCGGAGAAGTTGAAGGATATGTTTCCAGCATTTGCTAAGAGTTGTGGCGAGATGATTGACAAATGGGAAAGCATGGTCTCTACAGAAGGGTCTCGTGACTTAGATGTGTGGCCGGATTTGCAAAATATGACGGCGGATGTGATTTCTCGTACTGCATTTGGAAGTAATTTTGAAGAAGGAAAAAGGATTTTCCAACTCCTGAAGGAGTTGGCTCCACTTTTGATGACAGTACTAACGAAGAGAGTCTATCTTATTCCAGGATGGAGATTTATACCAACCAAGTTCAATAGGCGGCTAGGGAAAATTGATGACGAAACACGAGCTCTGGTTTTGGGTATTATAAGGAAAAGGCAAAGTTCTATGAAGGCAGGTGAAACGTTCAATGATGATCTATTAGGAACTCTTTTGGAATCCAACTTAAATCAAATTAGAGAACAAGGAAACAACAAAGATGTTGGAATGAATATTGACGATGTAATTAATGAATGTAAGCTTTTCTATTTTGCTGGCCAAGAAACCACAGCAGCATTACTTGTCTGGACAATGGTTTTACTTGGCCGGCACTTGGAATGGCAAGATCAAGCTAGAGCAGAAGTGCTTGAGGTTTTTGGGAACGGAAAATTGGATTTTGATGGTTTAAGTCGTCTAAAAGTTGTGACTATGATACTAAACGAGGTTCTCAGGCTATACCCTCCGGTTGGTATGTTATCTCGAGCAATTCATAAGGAAACAAAACTTGGGAACCTGTCATTACCATCAGGAGTGACCATTGGTGTGCCGTTAATTGGCATTCACAAAGATCCTCTGATGTGGGGTGAAGATGCACACGAGTTTAAACCGGAACGATTTTCAGAAGGAGTTTCAAAAGCAACAAAGAATCAAGTCTGTTTCATCCCTTTCGGATGGGGTCCTCGAATCTGCGTTGGTCAAAACTTTGCTATGATTGAAGCAAAAATTGCACTATCCATGATTTTGCAACGGTTCGCTTTTGAGCTTTCTCCTTATTACTCTCATGCTCCTACTTCAAATATCACTATTCAACCTCAACATGGAGCTCACCTCATCCTTCGTAAGTTGTAA | 1566 | 41.38 | MEVTASISVSVQLGLVLLLIIWGWKVINWIWVRPKRLEKYLRNQGLAGNSYRLLFGDFKDIATAMRRAKSLPMDFSHDIAPRVTPSSHITIHKYGKDSFTWLGTTPRVYITEPEQLKSVFSLTNDVRKMSSFAVARRLGRGLVSLEGSKWARHRKIINPAFHSEKLKDMFPAFAKSCGEMIDKWESMVSTEGSRDLDVWPDLQNMTADVISRTAFGSNFEEGKRIFQLLKELAPLLMTVLTKRVYLIPGWRFIPTKFNRRLGKIDDETRALVLGIIRKRQSSMKAGETFNDDLLGTLLESNLNQIREQGNNKDVGMNIDDVINECKLFYFAGQETTAALLVWTMVLLGRHLEWQDQARAEVLEVFGNGKLDFDGLSRLKVVTMILNEVLRLYPPVGMLSRAIHKETKLGNLSLPSGVTIGVPLIGIHKDPLMWGEDAHEFKPERFSEGVSKATKNQVCFIPFGWGPRICVGQNFAMIEAKIALSMILQRFAFELSPYYSHAPTSNITIQPQHGAHLILRKL | 521 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 6640430 | 6643287 | + | evm.model.ptg000002l.700 | HCH12g0959 | 555806 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0959 | 521 | PRINTS | E-class P450 group I signature | 459 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | E-class P450 group I signature | 320 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | E-class P450 group I signature | 469 | 492 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | E-class P450 group I signature | 340 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 15 | 514 | IPR050665 | GO:0004497(PANTHER) | |
| HCH12g0959 | 521 | SUPERFAMILY | Cytochrome P450 | 91 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | Gene3D | Cytochrome P450 | 84 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | P450 superfamily signature | 331 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | P450 superfamily signature | 460 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | P450 superfamily signature | 469 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | PRINTS | P450 superfamily signature | 383 | 394 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0959 | 521 | FunFam | Cytochrome P450 734A1 | 31 | 521 | - | - | |
| HCH12g0959 | 521 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 462 | 471 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0959 | 521 | CDD | CYP72 | 85 | 517 | - | - | |
| HCH12g0959 | 521 | Pfam | Cytochrome P450 | 93 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0959 | HCH-Chr12:6640430 | HCH12g0961 | HCH-Chr12:6693469 | 1.20E-281 | dispersed | |
| HCH12g0959 | HCH-Chr12:6640430 | HCH12g0960 | HCH-Chr12:6648557 | 6.30E-113 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0959 | - | - | - | 0.0 |