Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g0961 ATGGCAGTAACCGCATCGATTTCAGTTTGCGTTCAATTGGGTTTGGTATTGCTACTGATAATATGGGGATGGAAGGTTATAAACTGGATTTGGGTGAGGCCAAAGAGGCTTGAAAAGTACTTGAGAAATCAAGGCCTCGCCGGAAATTCTTATCGTCTTCTCTTTGGAGATTATAAGGATATAGCAACTGCTACGCGCCAAGCTAAATCACTTCCGATGGATTTCTCTCATGATATTGCTCCACGCGTCACCCCTTCCCCTCATATAACCATGCACAAATACGGTAAGGACTCTTTTACATGGCTTGGCCCAACTCCAAGAGTTTACATAACAAAGCCTGAACAACTGAAGTCTGTCTTCTCTCTTACAAATGACGTTCGTAAGATTACTTCGTTTCCCGTTGCAATGAAATTTGGAAGGGGACTCGTCACCCTCGAGGGAGCTAAATGGGCTAGACATAGAAAGATCATCAACCCTGCCTTTCATTCGGAGAAGTTGAAGGATATGTTTCCAGCATTTTCTAAGAGTTGTAGTGAGATGATTGACAAATGGGAAAGCATGGTCTCTGTAGAAGTGTCTCGTGACTTAGACGTGTGGCCGTATTTGCAAAATATGACGGCCGATGTGATTTCTCGTACTGCATTTGGGAGTAATTTTGAAGAAGGAAAAAAGATCTTCGAACTCTTGAAGGAGTTGGCTTCACTCTTGATGACAGTACTAACAAAGAGAGTCTATCATATTCCAGGATGGAGATTTATACCAACCAAGTTAAATAGGCGGATAGCGAAAATTGATAACGAAACACGAGCTCTGGTTTTGGGTATTATAAAGAAAAGGCAGAGTGCCATGAAGGCAGGTGAAGCCTTCAATGATGATCTATTAGGAACTCTTTCGGAATTCAACTTAAATCAAATTAGAGAACAAGGAAACAACAAAGATGTTGGAATGAGTATTGAAGATGTAATTAATGAATGTAATCTTTTCTATTTTGCTGGCCAAGAAACCACAGCAGCATTACTTGTCTGGACAATGGTTTTACTTGGCCGGCACTTGGAATGGCAAGATCAAGCTAGAGCAGAAGTGCTTGAGGTTTTTGGGAACGGAAAATTGGATTTTGATGGTTTAAGTCGTCTAAAAGTTGTGACTATGATACTAAACGAGGTTCTTAGGCTATACCCTCCGATTGGTATGTTATCTCGAGCAATTCACAAGGAAACAAAACTTGGGAACCTGTCATTACCATCAGGAGTGACCATTGGTGTGCCGTTAATTCACATTCACAAAGATCCTATGATATGGGGCGAAGATGCACACGAGTTTAAACCGGAACGATTTTCAGAAGGAGTTTCAAAAGCAACTAAGAATCAAGTTTGTTTCATCCCATTTGGATGGGGTCCTCGAATCTGCGTTGGTCAGAACTTTGCTATGATTGAAGCAAAAATTGCACTATCGATGATTTTGCAACGATTCTCTTTTGAGCTTTCTCCTTATTACTCTCACGTTCCTACTTCAAAGATTACTACTCAGCCTCAACATGGAGCTCATCTCATCCTCCGTAAGCTGTAA 1566 41.12 MAVTASISVCVQLGLVLLLIIWGWKVINWIWVRPKRLEKYLRNQGLAGNSYRLLFGDYKDIATATRQAKSLPMDFSHDIAPRVTPSPHITMHKYGKDSFTWLGPTPRVYITKPEQLKSVFSLTNDVRKITSFPVAMKFGRGLVTLEGAKWARHRKIINPAFHSEKLKDMFPAFSKSCSEMIDKWESMVSVEVSRDLDVWPYLQNMTADVISRTAFGSNFEEGKKIFELLKELASLLMTVLTKRVYHIPGWRFIPTKLNRRIAKIDNETRALVLGIIKKRQSAMKAGEAFNDDLLGTLSEFNLNQIREQGNNKDVGMSIEDVINECNLFYFAGQETTAALLVWTMVLLGRHLEWQDQARAEVLEVFGNGKLDFDGLSRLKVVTMILNEVLRLYPPIGMLSRAIHKETKLGNLSLPSGVTIGVPLIHIHKDPMIWGEDAHEFKPERFSEGVSKATKNQVCFIPFGWGPRICVGQNFAMIEAKIALSMILQRFSFELSPYYSHVPTSKITTQPQHGAHLILRKL 521
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 6693469 6699032 + evm.model.ptg000002l.698 HCH12g0961 555808
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH12g0961 521 Pfam Cytochrome P450 92 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 FunFam Cytochrome P450 734A1 31 521 - -
HCH12g0961 521 SUPERFAMILY Cytochrome P450 90 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 Gene3D Cytochrome P450 84 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH12g0961 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH12g0961 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 514 IPR050665 GO:0004497(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0959 HCH-Chr12:6640430 HCH12g0961 HCH-Chr12:6693469 1.20E-281 dispersed
HCH12g0961 HCH-Chr12:6693469 HCH12g0974 HCH-Chr12:7005974 9.20E-205 dispersed
HCH12g0960 HCH-Chr12:6648557 HCH12g0961 HCH-Chr12:6693469 5.90E-108 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g0961 - - - 0.0