Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0967 | ATGGCTACAACAGTTTCAATCTGTATCGCTGTGGGAAGCCTTCTGGTATGGGGATTGAGATTTCTAAACTGGGTTTGGCTGCGGCCGAGGAAGCTTGAAAAGTGCCTGAGACAGCAAGGTTTCGCCGGAAATTCTTACCGAATTTTCTTTGGGGACTTGAAGGAGAGAGCAGCAATGATGGAGCAAGCAAAATCAAAGCCTATGAACTACTCCCATGATATTGCTCCACGTGTCATCCCCTCCATTTATCAAACGATCAACAATTACGGTAAGAACTCATTCATGTGGCTAGGCCCATATCCAAGAATTAACATTTTGGATCCAGAGCAATTGAAAACTGCTCTTTCTCTAAACAATGACATTAGAAAGTTAAATGCAAATCCTCTTCTCAAGTTGCTGGTTGATGGACTTGTAAGACATGAGGGAGCAAAATGGGCTAAACATAGGAAGATTATCAATCCTGCATTTCATTTAGAGAAGTTGAAGGATATGGTTCCGGCCTTCCTTCAAAGTTGTACTGAGATGATTAGTAAATGGGAAGAATTGGTATCTGAAAAGGGATCGTGTGAGTTAGATGTGATGCCTTATCAACAAAATTGTGCTGCTGATGTCATTTCTCGAACAGCATTTGGGAGTAGTTTTGAGGAAGGTAAAAGGATCTTCCAACTTCAAAGAGAGTTGGCTAATTTGATGATTCAAGTTACCTCACGGATTTATATCCCAGGATGGAGGTTTCTACCAACTAAATTGAATAATAGATTGACAGAGATTGATAAAGAAATCAAAGCTTTGCTCTTTGGTATTATAAACAAAAGGCAAAGGGCTATAGATGTAGGTGAAGCTACAAGTGATCTATTAGGCATTCTCATGGAGTCCAATTTAAACGAAATTCGAAAACATGGAAACAACAAAGACATTGGAATGAGCATAGAAGATGTCATTGGAGAATGCAAGCTTTTCTATCTTGCTGGCCAAGAAACCACAGCTTCATTGCTTATTTGGACGATGGTTTTATTAAGTTCACACCCGGACTGGCAGGAGCGAGCAAGAGCAGAGGTTCTGAAGGTTTTTGGTAATAATAAACCAGATTTTGATGGTTTAAGTCGCCTGAAAATTGTAACTATGATTTTGAACGAGGTTCTCAGATTATACCCATCAGCAGGGCTACTTAGTCGTAGATTTGAAAAGGAAACTCAACTTGGGAAATTAATTTTACCAGCTGGAGTGATGATAAGCTTCCCCATTATTCTTATTCATCGTGATCGTGAGATATGGGGTGAGGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAAGGAGTTTCTAAAGCTACTAAAAATCAAATCTCATTCTTTCCATTTGGATGGGGCCCTCGAATATGCATCGGTCAGAACTTTGCTATGATAGAAGCGAAAATTGCAGTGTCAATGATTCTACAACACTTTTCGTTTGAGCTTTCTTCATCTTATACTCATGCTCCTACATCCATCATAACTGTGCAACCTCAGCATGGAGCTCATATAGTCCTACATAAACTCTAG | 1542 | 39.49 | MATTVSICIAVGSLLVWGLRFLNWVWLRPRKLEKCLRQQGFAGNSYRIFFGDLKERAAMMEQAKSKPMNYSHDIAPRVIPSIYQTINNYGKNSFMWLGPYPRINILDPEQLKTALSLNNDIRKLNANPLLKLLVDGLVRHEGAKWAKHRKIINPAFHLEKLKDMVPAFLQSCTEMISKWEELVSEKGSCELDVMPYQQNCAADVISRTAFGSSFEEGKRIFQLQRELANLMIQVTSRIYIPGWRFLPTKLNNRLTEIDKEIKALLFGIINKRQRAIDVGEATSDLLGILMESNLNEIRKHGNNKDIGMSIEDVIGECKLFYLAGQETTASLLIWTMVLLSSHPDWQERARAEVLKVFGNNKPDFDGLSRLKIVTMILNEVLRLYPSAGLLSRRFEKETQLGKLILPAGVMISFPIILIHRDREIWGEDADEFKPERFSEGVSKATKNQISFFPFGWGPRICIGQNFAMIEAKIAVSMILQHFSFELSSSYTHAPTSIITVQPQHGAHIVLHKL | 513 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 6917799 | 6921009 | + | evm.model.ptg000002l.692 | HCH12g0967 | 555814 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0967 | 513 | SUPERFAMILY | Cytochrome P450 | 75 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | CDD | CYP72 | 79 | 509 | - | - | |
| HCH12g0967 | 513 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | P450 superfamily signature | 323 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | Gene3D | Cytochrome P450 | 72 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | Pfam | Cytochrome P450 | 87 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | FunFam | Cytochrome P450 734A1 | 26 | 513 | - | - | |
| HCH12g0967 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0967 | 513 | PRINTS | E-class P450 group I signature | 86 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | E-class P450 group I signature | 312 | 329 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | E-class P450 group I signature | 200 | 218 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PRINTS | E-class P450 group I signature | 332 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0967 | 513 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 12 | 505 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0967 | HCH-Chr12:6917799 | HCH12g0974 | HCH-Chr12:7005974 | 2.60E-300 | dispersed | |
| HCH12g0964 | HCH-Chr12:6822415 | HCH12g0967 | HCH-Chr12:6917799 | 5.90E-37 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0967 | - | - | - | 0.0 |