Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH12g0974 | ATGGAGATTTCTATGGCTATGGCTACAACAGTTTCAATCTGTATCGCTGTGGGAAGCCTTCTGGTATGGGGATGGAGATTTCTAAACTGGGTTTGGCTGCGGCCGAGGAAGCTTGAAAAGTGCCTGAGACAGCAAGGTTTCGCTGGAAATTCTTACCGGATTTTCTTTGGGGACTTGAAGGAGAGAGCAGCAATGATGGAGCAAGCAAAATCAAAGCCTATGAACTACTCCCATGATATTGCTCCACGTGTCATCCCTTCCATTTATCAAACGATCAACAATTACGGTAAGAACTCATTCATGTGGCTAGGCCCATATCCAAGAATTAACATTTTGGATCCAGAGCAATTGAAAACTGCTCTTTCTCTAAACAATGACATTAGAAAGTTAAATGCAAATCCTCTTCTCAAGTTGCTGGTTGATGGACTTGTAAGACACGAGGGAGCAAAATGGGCTAAACATAGGAAGATTATCAATCCTGCATTTCATTTAGAGAAGTTGAAGGATATGGTTCCGGCCTTCCTTCAAAGTTGTACTGAGATGATTAGTAAATGGGAAGAATTGGTATCTGAAAAGGGATCGTGTGAGTTAGATGTGATGCCTTATCTACAAAATTGTGCTGCTGATGTCATTTCTCGAACAGCATTTGGGAGTAGTTTTGAGGAAGGTAAAAGGATCTTCCAACTTCAAAGAGAGTTGGCTAATTTGATGATTCAAGTTACCTCACGGATTTATATCCCAGGATGGAGGTTTCTACCAACTAAATTGAATAATAGATTGACAGAGATTGATAAAGAAATCAAAGCTTTGCTCTTTGGTATTATAAACAAAAGGCAAAGGGCTATAGATGTAGGTGAAGCAACAAGTGATCTATTAGGCATTCTCATGGAGTCCAATTTAAACGAAATTCGAAAACATGGAAACAACAAAGACATTGGAATGAGCATAGAAGATGTCATTGGAGAATGCAAGCTTTTCTATCTTGCTGGCCAAGAAACCACAGCTTCATTGCTTATTTGGACGATGGTTTTATTAAGTTCACACCCGGACTGGCAGGAGCGAGCAAGAGCAGAGGTTCTGAAGGTTTTTGGTAATAATAAACCAGATTTTGATGGTTTAAGTCGCCTGAAAATTGTAACTATGATTTTGAACGAGGTTCTCAGATTATACCCATCAGCAGGGCTACTTAGTCGTAGATTTGAAAAGGAAACTCAACTTGGGAAATTAATTTTACCAGCTGGAGTGATGATAAGCTTCCCCATTATTCTTATTCACCGTGATCGTGAGATATGGGGTGAGGATGCAGATGAATTTAAACCAGAAAGATTTTCTGAAGGAGTTTCTAAAGCTACTAAAAATCAAATCTCATTCTTTCCATTTGGATGGGGCCCTCGAATATGCATCGGTCAGAACTTTGCTATGATAGAAGCGAAAATTGCAGTGTTAATGATTCTACAACACTTTTCGTTTGAGCTTTCTTCATCTTATACTCATGCTCCTACATCCATCATAACTGTGCAACCTCAGCATGGAGCTCATATAGTCCTACATAAACTCTAG | 1560 | 39.55 | MEISMAMATTVSICIAVGSLLVWGWRFLNWVWLRPRKLEKCLRQQGFAGNSYRIFFGDLKERAAMMEQAKSKPMNYSHDIAPRVIPSIYQTINNYGKNSFMWLGPYPRINILDPEQLKTALSLNNDIRKLNANPLLKLLVDGLVRHEGAKWAKHRKIINPAFHLEKLKDMVPAFLQSCTEMISKWEELVSEKGSCELDVMPYLQNCAADVISRTAFGSSFEEGKRIFQLQRELANLMIQVTSRIYIPGWRFLPTKLNNRLTEIDKEIKALLFGIINKRQRAIDVGEATSDLLGILMESNLNEIRKHGNNKDIGMSIEDVIGECKLFYLAGQETTASLLIWTMVLLSSHPDWQERARAEVLKVFGNNKPDFDGLSRLKIVTMILNEVLRLYPSAGLLSRRFEKETQLGKLILPAGVMISFPIILIHRDREIWGEDADEFKPERFSEGVSKATKNQISFFPFGWGPRICIGQNFAMIEAKIAVLMILQHFSFELSSSYTHAPTSIITVQPQHGAHIVLHKL | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 7005974 | 7068208 | + | evm.model.ptg000002l.685 | HCH12g0974 | 555821 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH12g0974 | 519 | Gene3D | Cytochrome P450 | 77 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 511 | IPR050665 | GO:0004497(PANTHER) | |
| HCH12g0974 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH12g0974 | 519 | Pfam | Cytochrome P450 | 93 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | CDD | CYP72 | 85 | 515 | - | - | |
| HCH12g0974 | 519 | SUPERFAMILY | Cytochrome P450 | 81 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | E-class P450 group I signature | 92 | 111 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH12g0974 | 519 | FunFam | Cytochrome P450 734A1 | 32 | 519 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g0469 | HCH-Chr12:2763627 | HCH12g0974 | HCH-Chr12:7005974 | 1.50E-138 | dispersed | |
| HCH12g0960 | HCH-Chr12:6648557 | HCH12g0974 | HCH-Chr12:7005974 | 1.10E-77 | dispersed | |
| HCH12g0961 | HCH-Chr12:6693469 | HCH12g0974 | HCH-Chr12:7005974 | 9.20E-205 | dispersed | |
| HCH12g0964 | HCH-Chr12:6822415 | HCH12g0974 | HCH-Chr12:7005974 | 3.70E-39 | dispersed | |
| HCH12g0967 | HCH-Chr12:6917799 | HCH12g0974 | HCH-Chr12:7005974 | 2.60E-300 | dispersed | |
| HCH12g0974 | HCH-Chr12:7005974 | HCH8g0612 | HCH-Chr8:42926925 | 5.30E-144 | dispersed | |
| HCH12g0973 | HCH-Chr12:6990153 | HCH12g0974 | HCH-Chr12:7005974 | 2.00E-61 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH12g0974 | - | - | - | 0.0 |