Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g1191 ATGGAAGGTATAATCACTAGAAGGGTTATTCCATCAGACAACAGTTGCCTTTTCAATGCTGTTGGGTATGTTATGGACCATGATAAACACAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTTGCTAGTGATCCAGCAAAGTATTCTGAAGCATTTCTTGGAAAGTCAAATGCAGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTGCTATTGAGCTTTCTATATTATCCGAGTATTATGGGCGTGAAATTGCAGCGTACGATATCCAGACCACACGATGTGATTTGTATGGTCAGGAAAAGAAATATTCGGAAAGGATTTTGCTCATTTATGATGGACTTCATTATGATGCTTTAGTTATGTCTCCATTTGAGGGGGCTCCCGAGGAGTTCGACCAGACCATATTTTCTGTGCATAATAATAGGACAGTTGGGCCTATTGAGGAGCTAGCTCTTCAATTTGCAAAAGAGCAACACAGGAAAAGGAGATACACAGACACTGCCAACTTCACTCTACGCTGCGGTGTTTGCCAAATCGGAGTCATCGGCCAGACGGAGGCTGTAGAGCACGCAAAAGCAACTGGCCATGTCAACTTTCAAGAATATAGATAA 627 43.06 MEGIITRRVIPSDNSCLFNAVGYVMDHDKHKATELRQVIAATVASDPAKYSEAFLGKSNAEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERILLIYDGLHYDALVMSPFEGAPEEFDQTIFSVHNNRTVGPIEELALQFAKEQHRKRRYTDTANFTLRCGVCQIGVIGQTEAVEHAKATGHVNFQEYR 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10430820 10433654 - evm.model.ptg000002l.468 HCH12g1191 556038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g1191 208 CDD OTU_plant_OTU1_2-like 3 166 - -
HCH12g1191 208 Gene3D - 1 173 - -
HCH12g1191 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
HCH12g1191 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
HCH12g1191 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 5 206 - GO:0004843(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0016579(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)
HCH12g1191 208 Pfam OTU-like cysteine protease 11 108 IPR003323 -
HCH12g1191 208 SUPERFAMILY Cysteine proteinases 7 125 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g1191 K13719 - csv:101222942 380.178