Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g1259 ATGGCCCGTTGTTCTTTTCTCTCCCTCTCCCTCTCCCTCTTTCTCTTCCTCCTCATTTCCTCCGCCTCTTCCCACGGCGGCCATGACGACGGCGACAATGACACCACCGATGGAGCTTCGGTCACCACCAACCTCCGTTCAAAGCCACTGGTGTTGGTTAAAATATGGTGTTTGATATTGATATTTATTGGGACTTTTGTGGCCGGAGTTTCTCCATATTTTTTGAAATGGAATGAAGGGTTTCTTGTTTTGGGGACTCAGTTTGCTGGAGGGGTGTTCTTGGGAACTGCCATGATGCATTTTTTGAGTGATGCGAATGAGACGTTTGGTGATTTGATGAGTGATAAAGAGTATCCCTTTGCTTTTATGTTGGCTTGTTTTGGGTATTTGTTGACCATGGCTGCTGATTGTCTTATTTCTTTTCTTTATTCCAAGAACAACAATGGTGTTGCTGGTCAAGATGTTGAGCTTCAAGGAGCTGCAACTTCACCATCAAAGTTTCAGGTCCAAAGTGGCAGCCATCATCCAAACCCAGCTCTTACAGAAGTTGGTTCATTTGGAGATAGCATTTTGCTGATTATTGCATTGTGCTTCCACTCTGTCTTTGAGGGTATTGCAATTGGTGTAGCAGAAACCAAAGAAGATGCCTGGAAAGCCCTCTGGACAATCTCCCTGCACAAGGTTTTTGCAGCCATTGCCATGGGCATTGCTCTCCTTCGTATGGTCCCGAATCGTCCCTTCTTGTCATGCACTGCTTACTCGTTTGCTTTTGCAATATCAAGCCCCATTGGTGTGGCTATCGGAATCGTAATAGACGCCACCACCCAAGGCTCGGTTGCAGATTGGATATTTGCAATTTCAATGGGTCTGGCTTGTGGAGTGTTCATATATGTATCAATAAACCATCTCCTATCAAAGGGATACATAGCGAGGAATCCAGTTTTGGTTGACAATGCCAATTACAAGTTTGTTGCAGTGTTGTTAGGTATTGGAGTGATAGCTGTTGTGATGATATGGGATACTTGA 1026 44.74 MARCSFLSLSLSLFLFLLISSASSHGGHDDGDNDTTDGASVTTNLRSKPLVLVKIWCLILIFIGTFVAGVSPYFLKWNEGFLVLGTQFAGGVFLGTAMMHFLSDANETFGDLMSDKEYPFAFMLACFGYLLTMAADCLISFLYSKNNNGVAGQDVELQGAATSPSKFQVQSGSHHPNPALTEVGSFGDSILLIIALCFHSVFEGIAIGVAETKEDAWKALWTISLHKVFAAIAMGIALLRMVPNRPFLSCTAYSFAFAISSPIGVAIGIVIDATTQGSVADWIFAISMGLACGVFIYVSINHLLSKGYIARNPVLVDNANYKFVAVLLGIGVIAVVMIWDT 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13183158 13185227 - evm.model.ptg000002l.400 HCH12g1259 556106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g1259 341 PANTHER ZINC/IRON TRANSPORTER 50 339 - GO:0005385(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
HCH12g1259 341 Pfam ZIP Zinc transporter 52 336 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g1259 HCH-Chr12:13183158 HCH3g1378 HCH-Chr3:51540787 3.20E-65 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g1259 K14709 - csv:101208105 496.508