Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH12g1396 ATGTTCAAAATCGTAAGTCAACGGCGAAATGAGTCCTCGCCGGAAAAGCTCTTCCTATTAAAACAAGTAATGCTGCTTCTTCTCGTCTTCCTCGTTTCCTCTGTTACTGCCGGAGAAAACTACTCCTTCAAAAACCGTAAGATTTCTACAACGTCTTCCAAGACGAACTATGCCGTTATCTTTGACGCTGGAAGCTCCGGCAGCCGTGTTCATGTCTTCAACTTCAATCAGAATCTAGATCTCCTATTTATCGGTACAGAGATTGAGATTTTTTCACAGATTAAACCGGGGCTGAGTGCGTATGCAGACGACCCGGAGAAAGCTGCAGCTTCTCTAATTCCTCTATTGGAGAAAGCAGAAAGTACGGTTCCTCAAGACTTGCATTATGTGACACCACTTAGACTTGGGGCAACTGCAGGGTTGAGGTTTTTGGAAGGTGATAAATCTGATAAGATTTTGGAAGCGGTGAGGAATCTGATTAAAACTAAGAGCAACTTCAAGTACGAAGCAGATGAGGTTTCGGTTCTAGAAGGAACAGAAGAAGGTTCCTATCAATGGTTGACAATAAACTATTTGCTAGAGAATTTGGGTAAGAAATATGGGAATACAGTGGGAGTGATTGATTTGGGAGGAGGATCTGTTCAAATGGCATATGCAATCTCGGATGAAGAAGCAGGAAAGGCACCTGTGTCTTTGGATGGAAAGAATAAATATATTCAAAATCTGAAAGTGAAGGGTACAAAATATAACCTCTACGTCCACAGTTATTTGCGTTATGGCTTACAAGCTGCACGAGTTGAGATTCTCAAAGTGACCAAAGACTATGGTAACCCTTGCGTTTTAACTGGTTTTGAAGGAACATACACATACGGTGGGGAGGAATACAGAGCATCAGCTCCTCGATCAGGATCAAGCTTCAACAGTTGCAGGAAGGTGATTTTAGAGGCTCTAAAAATCAACAAAGCATGCAGCTACGATGAATGCACTTTCGACGGTATATGGAATGGTGGTGGAGGTAATGGTTCCAGGAATCTCTACGTTGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCGGGTTTTATTGACTCTGAGGCATCAGAAGCCGTAGTTAAACCTATAGACTTCAAGAAAGCTGCAAAAAGTGCTTGTAGAACTAAATTTGATGAGGCCAAATCCAGATATCCAAATGTTTATGCATCGGACTTGCAATTTGTCTGCATGGATCTCGCTTACGAATATGCACTCCTTGTTGATGGATTTGGTATCCATCCTCAGAAAAAGATAACATTGGTGAAGAAAGTCGGCTATCATGGTTCGGTTGCAGAGGCTGCATGGCCATTAGGCAATGCCATAGCTGTCGTCTCTTCATCAAAATACTCCACCGCTGATCATTGA 1395 42.58 MFKIVSQRRNESSPEKLFLLKQVMLLLLVFLVSSVTAGENYSFKNRKISTTSSKTNYAVIFDAGSSGSRVHVFNFNQNLDLLFIGTEIEIFSQIKPGLSAYADDPEKAAASLIPLLEKAESTVPQDLHYVTPLRLGATAGLRFLEGDKSDKILEAVRNLIKTKSNFKYEADEVSVLEGTEEGSYQWLTINYLLENLGKKYGNTVGVIDLGGGSVQMAYAISDEEAGKAPVSLDGKNKYIQNLKVKGTKYNLYVHSYLRYGLQAARVEILKVTKDYGNPCVLTGFEGTYTYGGEEYRASAPRSGSSFNSCRKVILEALKINKACSYDECTFDGIWNGGGGNGSRNLYVASFFFDKAAQAGFIDSEASEAVVKPIDFKKAAKSACRTKFDEAKSRYPNVYASDLQFVCMDLAYEYALLVDGFGIHPQKKITLVKKVGYHGSVAEAAWPLGNAIAVVSSSKYSTADH 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 36367308 36371342 + evm.model.ptg000002l.263 HCH12g1396 556243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH12g1396 464 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 176 191 IPR000407 GO:0016787(InterPro)
HCH12g1396 464 CDD NBD_sugar-kinase_HSP70_actin 59 218 - -
HCH12g1396 464 Gene3D Exopolyphosphatase. Domain 2 178 435 - -
HCH12g1396 464 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 23 456 IPR000407 GO:0016787(InterPro)
HCH12g1396 464 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 459 IPR000407 GO:0016787(InterPro)
HCH12g1396 464 Gene3D - 43 177 - -
HCH12g1396 464 FunFam Apyrase 1 177 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g1396 HCH-Chr12:36367308 HCH6g0566 HCH-Chr6:33190395 5.70E-158 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH12g1396 K14641 - mtr:11443103 509.22