Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH12g1415 | ATGACAAAGATGAGGAATCGGGTTTCTTTTATCGTCAATGTTTTCGTATTTTGTGCTTTATTCTCATTGCTTGGCGAAAAATCAATGGTAGAAGCAGAAGAAGAACAAACCAAGGTTTACATCGTTTACCTTGGAGAAAGCCAATTTAGTAGTAGTAAATTGGCAACCGAATCTCACCACGATTTGCTTTCTACTACATTGGGAAGCAAGGAGAAGTCATTGAAATCAATGATCTATAGCTATCGACATGGATTTTCCGGGTTTGCGGCTAAGCTCACCAAGTCTCAAGCGCAACACCTAGCTGATAAGCCCGGGGTCGTTCGTGTTATTCCAAACACAATTTACACGTTGCAGACTACTAGGAGTTGGGATTTCCTTGGACTCTCTTCTTCTCATTCCCATTCTTCTAATCTTCTTCATCGTGGTAAAAAGGGTGATGGAGTCATCATAGGCGTCCTCGATACAGGAATTTGGCCGGAGTCGGAAGCTTTTAGCGATAAAGGACTAGGCCCGGTACCAAGTCGATGGAAAGGTATATGTGAAACCGGAGATCAATTCAATTCCACAAACTGCAACAGAAAAATCATCGGTGCTCGTTGGTACTCTAGTTTGCTTGAGGCCGAGTTCCCTCCGGGATCGAACGACACCATAATGGACGAGTACTTATCTGCAAGAGATTTCAATGGACATGGAACACACGCAGCGAGCACCGCCGCAGGTTCTTTGGTTGAAAATGTAAGCTACAGAAATCTAGGATTTGGTACGATGAGAGGCGGAGCACCACATGCTCGTTTAGCAATATACAAGGTTTGTTGGGGCCGGACGGGTGAATGCTCAACGGCTGATATATTGAAAGCCATTGATGAAGCAATTCATGACGGCGTTGATGTTTTATCTCTCTCACTTGGTAAAGCGGTTCCATTGTTCCCTGAGTTTGATGAAAATAATGGAGTTGCGATTGGTTCATTCCATGCGACAGCAAGAGGTATTTCTGTTGTCTGTGCTGCTGGTAACGATGGCCCTACTTCACAGACAGTATTTAACGTGGCACCTTGGGTTTTGACTGTTGCTGCAAGTTCCATGGATAGAGCTTTTCTTGCTCCTATTACTCTAGGAGACAATTCTACTTTTCTGGGTCAAAGCTTATTCAGTGGGATGAACATTAAGAGTGGATTGACATATCCAAATTCCAAAGGATTGGACCCCAGCATTGCAGGTATTTGCGAGGGAATATCAGTAAATGATACTTCCATACGTGGAAAAGTAGTGCTTTGCTTTGCTCACTTAGCTGACAGCAACGCTGTAGCGAAAGCTTTTGTGGCTGTGAGAGGAGCAAATGGAATTGGACTAATCGTCGCTGGACAACATGATGATATCTTGTTTTCGTGTGGTGATGACTTTCCATGCATTGTGGTTGACTCTGAGATTGGCACCAAAATATACTTTTACATCCGGGCAAATAGTAATCCACAAGTAAAGTTGAGCTCTTCAAGAACCATAGTGGGGAAGCCTATATCAGCCCACATTGCCTCTTTCTCATCCAGAGGTCCAAATTCCGTTGCATCTGCAATTCTCAAGCCAGAAATAGCCGCACCAGGAGCAAATATTTTAGCTGCAACTTCACCTGATGACCCATTTAGTGATAATGGTTATGGAATTCAATCAGGGACTTCAATGGCAACACCTCATATTTCAGGCATTGTGGCTCTTCTTAAATCATTACATCCGACTTGGTCACCTTCTGCCATTAAATCAGCCCTCATCACAACTGCATGGAAAACTCATCCGTCAGGACTACCAATATTTGCTACGGGATCTCCTCCTAAAATCGCTGATCCATTTGACTATGGAGGTGGAATAGTCAATCCAAATGCTGCTGGAAACCCAGGACTCGTTTATGATATGAGTATTACAGATTATGTATTTTACCTCTGCTCAATGGGTTATAACAACTCAGTCATTTCTCTCTTAACACAAGAAAAAACAAACTGCCCACATCAGAAACCATCAATATTGGATGTTAACTTACCTTCCATCACAATTCCAACACTTAGAAACTCGACGACCGTTACTCGAACAGTTACGAATGTCGGAAATTCAACGTCGATTTATAAGGCTTTGATTAAGCCACCACCTGGGACAAAGGTAAGTGTTGAACCAAATGTATTGATCTTCAATTCCCAAGTTAGGAAATTGTCTTTCAAGGTTACGTTTTCAACAGCCCTACGAAGGAACTACGGATTTTCTTTTGGAAGCCTCACTTGGACTGATGGAGTGTATGTTGTCAATAGTCCTTTGTCTGTTAGAACTGATTTCCTCTAG | 2322 | 42.72 | MTKMRNRVSFIVNVFVFCALFSLLGEKSMVEAEEEQTKVYIVYLGESQFSSSKLATESHHDLLSTTLGSKEKSLKSMIYSYRHGFSGFAAKLTKSQAQHLADKPGVVRVIPNTIYTLQTTRSWDFLGLSSSHSHSSNLLHRGKKGDGVIIGVLDTGIWPESEAFSDKGLGPVPSRWKGICETGDQFNSTNCNRKIIGARWYSSLLEAEFPPGSNDTIMDEYLSARDFNGHGTHAASTAAGSLVENVSYRNLGFGTMRGGAPHARLAIYKVCWGRTGECSTADILKAIDEAIHDGVDVLSLSLGKAVPLFPEFDENNGVAIGSFHATARGISVVCAAGNDGPTSQTVFNVAPWVLTVAASSMDRAFLAPITLGDNSTFLGQSLFSGMNIKSGLTYPNSKGLDPSIAGICEGISVNDTSIRGKVVLCFAHLADSNAVAKAFVAVRGANGIGLIVAGQHDDILFSCGDDFPCIVVDSEIGTKIYFYIRANSNPQVKLSSSRTIVGKPISAHIASFSSRGPNSVASAILKPEIAAPGANILAATSPDDPFSDNGYGIQSGTSMATPHISGIVALLKSLHPTWSPSAIKSALITTAWKTHPSGLPIFATGSPPKIADPFDYGGGIVNPNAAGNPGLVYDMSITDYVFYLCSMGYNNSVISLLTQEKTNCPHQKPSILDVNLPSITIPTLRNSTTVTRTVTNVGNSTSIYKALIKPPPGTKVSVEPNVLIFNSQVRKLSFKVTFSTALRRNYGFSFGSLTWTDGVYVVNSPLSVRTDFL | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 37458303 | 37463378 | - | evm.model.ptg000002l.244 | HCH12g1415 | 556262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH12g1415 | 773 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 556 | 566 | IPR023828 | - | |
HCH12g1415 | 773 | Gene3D | Peptidase S8/S53 domain | 147 | 640 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
HCH12g1415 | 773 | Pfam | Subtilase family | 145 | 592 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
HCH12g1415 | 773 | Gene3D | - | 362 | 501 | - | - | |
HCH12g1415 | 773 | Gene3D | - | 644 | 771 | - | - | |
HCH12g1415 | 773 | SUPERFAMILY | Subtilisin-like | 38 | 702 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
HCH12g1415 | 773 | CDD | PA_subtilisin_like | 369 | 494 | - | - | |
HCH12g1415 | 773 | FunFam | Subtilisin-like protease SBT1.5 | 644 | 771 | - | - | |
HCH12g1415 | 773 | FunFam | Subtilisin-like protease SBT5.3 | 28 | 118 | - | - | |
HCH12g1415 | 773 | Pfam | Peptidase inhibitor I9 | 39 | 118 | IPR010259 | - | |
HCH12g1415 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 226 | 239 | IPR015500 | - | |
HCH12g1415 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 145 | 164 | IPR015500 | - | |
HCH12g1415 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 555 | 571 | IPR015500 | - | |
HCH12g1415 | 773 | Pfam | Fibronectin type-III domain | 673 | 768 | IPR041469 | - | |
HCH12g1415 | 773 | CDD | Peptidases_S8_3 | 115 | 592 | IPR034197 | - | |
HCH12g1415 | 773 | FunFam | Subtilisin-like protease SBT1.5 | 147 | 371 | - | - | |
HCH12g1415 | 773 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 122 | 627 | - | - | |
HCH12g1415 | 773 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 39 | 765 | IPR045051 | - | |
HCH12g1415 | 773 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 25 | 118 | IPR037045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g1415 | HCH-Chr12:37458303 | HCH14g1025 | HCH-Chr14:37448572 | 1.80E-148 | dispersed | |
HCH12g1413 | HCH-Chr12:37403770 | HCH12g1415 | HCH-Chr12:37458303 | 1.70E-66 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH12g1415 | - | - | - | 0.0 |