Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH12g1497 | ATGGGTTGTGCTCAAGCCAAACCTTCTGTTACTTCTCCTGCTGGGGGAGTAGAGAATTTGAAATCGGAAAATGGGTATGTTGGGATTTCTGATTTTAAGACTCACCGGCGATCCACGGGGCAGAGATATGTTAAGAAGGACTCTGCCGGTGGCGGTGGAAAGAACGACGGTGGCGGTGGCGGTGGTCGAATTGCTTCACAGAAGACTTCATTGTCCAAGAGTGTAGGAGATGATGAGTTGGTTGATGGATGGCCTAAATGGCTTACTAGTAATATTCCTAAACATGTTTTGGCTGGATTGGTTCCTAAGAGTGTTGAGGCCTATGATAAGCTTGATAAGGTAGGCCAAGGAAGTTACAGCAATGTGTACAAGGCTCGAGAAAGGGAGACTGGGAAAATCGTTGCACTGAAGAAAGTCCGTTTTGATACATCAGAACCTGAGAGTGTGAAGTTCATGGCCCGAGAAATTATGATATTACTGAAATTGGATCATCCCAACATTGTCAAACTTGAAGGATTGGCCACTTCACGAATGCAGTTCAGTCTTTATCTCGTCTTTGAGTTCATGCAGACTGATTTGGCCAGAGTTATTTCACGTCCGGGAACACGGCTTACTGAGCCTCAGGTCAAGTGTTATATGCATCAACTACTCTCTGGTTTGCGGCACTGTCATGATAAAGGAATATTACACCGAGATATCAAAGGCTCCAACCTGTTGATAGACAAAGATGGGATGCTAAAGATTGGCGATTTTGGGCTTGCTAATTTCTTTAGTCCAGGCTCAAAACACCACCTTACAAACCGTGTTGTGACACTTTGGTACAGAGCTCCAGAGCTATTGTTGGGTGCTACGGATTATGGAGTTAGCATCGATCTATGGAGTGCTGGATGCCTCTTGGCAGAAATGTTCACTGGAAAGCCAATTCTACCCGGTCGAACAGAGGTTGAGCAACTTCACAAAATTTTCAAGTTATGTGGTACCCCATCAGAAGACTATTGGAAAAAACTGAAGCTTTTACCAACGTTCAAGCCTCCACATTCATACAGACCTAGTCTTGTGGAATCATTTAAGCATTTACCTTCATCTTCTTTAGGCCTGCTTACCACTCTACTTGCATTAGATCCTGCATATCGTGGCTCTGCATCTTTAGCCCTCGACAATGAATTCTTTTACACAAGTCCTCTGGCATGCGACCTTTCCGGCCTTCCTGTAATTTATATCAAGGATGATGAACTAAATCAAGCGAATCAACAAAAGAAGTCTCGGAATTCGAAAGTGACAAGGCGCTCTCAAACACACCGTGAGCATAGGAGGAAAGATTTAACAGCTGAAAAACCAAAAGTTTCAACTTTTCCCAAAGAGTTGCTGCATAAAGCTTCTAGTGCTAATGACTTAAGGGAAGAGCCAGGAAGTACTACAACAAGTACCTCCTCAGGTGTGAACACAGGAGGGCAAAAGGGGAGCCCCCACTTCTTGCTATCTCCAATTGCATCTTCTAATAAGAAATCCTCAAGAATTCTAGGCCGTTTTGGATCTACCCAGAACCTCAACAACTTGCCTCCACTGCCCAAGTCCAGAAGGTACTCGACTTTCTACGACAAAGACGATGGCGTGCACGTCAATAGCAACAATGTTCGGAGGTCTGTCTCGACCAGAGATTTCAGGAATTTAGATGGAAAGGAGCCATTGAAATTCTATGCTGTTGATGCTTAG | 1713 | 44.31 | MGCAQAKPSVTSPAGGVENLKSENGYVGISDFKTHRRSTGQRYVKKDSAGGGGKNDGGGGGGRIASQKTSLSKSVGDDELVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKVGQGSYSNVYKARERETGKIVALKKVRFDTSEPESVKFMAREIMILLKLDHPNIVKLEGLATSRMQFSLYLVFEFMQTDLARVISRPGTRLTEPQVKCYMHQLLSGLRHCHDKGILHRDIKGSNLLIDKDGMLKIGDFGLANFFSPGSKHHLTNRVVTLWYRAPELLLGATDYGVSIDLWSAGCLLAEMFTGKPILPGRTEVEQLHKIFKLCGTPSEDYWKKLKLLPTFKPPHSYRPSLVESFKHLPSSSLGLLTTLLALDPAYRGSASLALDNEFFYTSPLACDLSGLPVIYIKDDELNQANQQKKSRNSKVTRRSQTHREHRRKDLTAEKPKVSTFPKELLHKASSANDLREEPGSTTTSTSSGVNTGGQKGSPHFLLSPIASSNKKSSRILGRFGSTQNLNNLPPLPKSRRYSTFYDKDDGVHVNSNNVRRSVSTRDFRNLDGKEPLKFYAVDA | 570 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 40968015 | 40971690 | + | evm.model.ptg000002l.162 | HCH12g1497 | 556344 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH12g1497 | 570 | ProSiteProfiles | Protein kinase domain profile. | 108 | 390 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH12g1497 | 570 | ProSitePatterns | Protein kinases ATP-binding region signature. | 114 | 137 | IPR017441 | GO:0005524(InterPro) | |
HCH12g1497 | 570 | MobiDBLite | consensus disorder prediction | 415 | 495 | - | - | |
HCH12g1497 | 570 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 228 | 240 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH12g1497 | 570 | Gene3D | Transferase(Phosphotransferase) domain 1 | 191 | 444 | - | - | |
HCH12g1497 | 570 | MobiDBLite | consensus disorder prediction | 436 | 452 | - | - | |
HCH12g1497 | 570 | SUPERFAMILY | Protein kinase-like (PK-like) | 103 | 394 | IPR011009 | - | |
HCH12g1497 | 570 | SMART | serkin_6 | 108 | 390 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH12g1497 | 570 | PANTHER | CELL DIVISION PROTEIN KINASE | 108 | 390 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
HCH12g1497 | 570 | Pfam | Protein kinase domain | 108 | 390 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH12g1497 | 570 | Gene3D | Phosphorylase Kinase; domain 1 | 98 | 190 | - | - | |
HCH12g1497 | 570 | MobiDBLite | consensus disorder prediction | 465 | 495 | - | - | |
HCH12g1497 | 570 | FunFam | Putative serine/threonine-protein kinase | 191 | 428 | - | - | |
HCH12g1497 | 570 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
HCH12g1497 | 570 | FunFam | probable serine/threonine-protein kinase At1g54610 | 95 | 190 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0472 | HCH-Chr10:3860347 | HCH12g1497 | HCH-Chr12:40968015 | 4.00E-37 | dispersed | |
HCH12g1497 | HCH-Chr12:40968015 | HCH14g0179 | HCH-Chr14:27401142 | 2.40E-150 | dispersed | |
HCH12g1497 | HCH-Chr12:40968015 | HCH6g0679 | HCH-Chr6:39966838 | 3.40E-120 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81145 | PF00069 | Pkinase | 2.50E-69 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH12g1497 | K08819 | - | csv:101209601 | 783.867 |