Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0115 ATGGCTAACGAGCAACTCGAGGTTTTGAACATGCTTGATCGTGCAAAAACTCAATTCTACCACTTTACTGCAGTGGTAATTGCCGGAATGGGATTCTTCACCGATTCTTATGATCTTTTCTGCATCTCTCTCGTCACTAAACTCCTCGGCCGCATTTATTATCATGTAGACGGTTCGTCTAAGCCTGGAACTCTGCCTCCCAATGTCGCTGCGGCCGTTAACGGCGTCGCGCTTTGTGGAACCCTAGCCGGACAACTTTTCTTTGGGTGGCTTGGTGATAAGCTTGGTCGGAAACGCGTCTATGGCGTAACCCTAATGCTGATGGTTATATGTTCTATTTGCTCCGGTCTTTCTTTCGGGAGCTCGCCGACGTCGGTTATCGCGACGTTGTGTTTTTTTCGATTCTGGTTAGGGTTTGGAATTGGTGGTGATTATCCGTTATCGGCGACGATCATGGCGGAATATTCAAATAAGAAATCACGTGGGGCTTTTATCGCGGCGGTTTTCGCCATGCAAGGGTTTGGAATTCTCGCTGGAGGGACGGTGGCTGTTGCAATATCGTCTTTGTTTCGTGCTGTATACCACGCGCCACCGTATTCGGCTGATCCGATAGCATCGACACCGCCGCAATCGGATTATGTATGGAGAATTATACTGATGATTGGAGCTTTGCCGGCGGTTCTGACGTATTATTGGAGAATGAAAATGCCTGAAACACCACGTTATACTGCTTTAGTTGCCAAGAATCAGAAAAAAGCTTGCGATGATATGTCAAAAATCTTGAACGTTGATATCAAAGAAGAGGAGAATAAATCATCACCGCTGATGAAGAATTCTTTTGTATTTTTCAGTAAGGAGTTTCTACGCCGCCATGGGCTTCATCTTGTAGGCACCGCCAGCACTTGGTTCTTGATTGACGTTGCCTACTACAGCCAGAATCTCTTCCAAAAAGACATCTTCACCGCTGTCGGTTGGTTGCCGCCAGCCAAGACCATGAGTGCCTTGGAAGAGGTTTTCAAAATAGCTAGGGCACAAACCCTAATAGCCCTTTGCGGCACAGTCCCTGGCTACTGGGCCACCGTCTTCCTTATCGATCATATCGGTCGGTTTCTTATCCAAATTATCGGCTTCTTCTTCATGACAGTCTTCATGTTTGCCCTAGCCATTCCTTACCATCACTGGACTCAGAAGGCGAACCATATCGGTTTTGTGGTGATGTATGGACTCACATTCTTTTTCGCCAACTTCGGACCAAATAGCACGACCTTCGTCGTGCCAGCGGAGATATTTCCATCGAGATTTCGATCAACTTGTCATGGGATATCGGCGGCATCAGGGAAGGCAGGTGCAATTGTTGGAGCTTTAGGGTTTCTGTATGCTGCTCAGAGCCAGGATAAGACAAAGACTGATGCTGGTTACTCTCCTGGAATTGGAATGAGGAATTCTTTGATCATATTGGGAGTTATTAATATAGTAGGTTTTTTCTTCACTCTTTTGATTCCAGAATCTAAAGGAAAATCCTTGGAAGAAATGTCAAAAGAAAACCAGGCAGAAGATGATCATCAGGAGCAGACTAATAGAGTTGAGATTGTTTGA 1596 45.86 MANEQLEVLNMLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYHVDGSSKPGTLPPNVAAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGVTLMLMVICSICSGLSFGSSPTSVIATLCFFRFWLGFGIGGDYPLSATIMAEYSNKKSRGAFIAAVFAMQGFGILAGGTVAVAISSLFRAVYHAPPYSADPIASTPPQSDYVWRIILMIGALPAVLTYYWRMKMPETPRYTALVAKNQKKACDDMSKILNVDIKEEENKSSPLMKNSFVFFSKEFLRRHGLHLVGTASTWFLIDVAYYSQNLFQKDIFTAVGWLPPAKTMSALEEVFKIARAQTLIALCGTVPGYWATVFLIDHIGRFLIQIIGFFFMTVFMFALAIPYHHWTQKANHIGFVVMYGLTFFFANFGPNSTTFVVPAEIFPSRFRSTCHGISAASGKAGAIVGALGFLYAAQSQDKTKTDAGYSPGIGMRNSLIILGVINIVGFFFTLLIPESKGKSLEEMSKENQAEDDHQEQTNRVEIV 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 725824 727419 + evm.model.ptg000021l.115 HCH13g0115 556620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0115 531 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 13 510 - -
HCH13g0115 531 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
HCH13g0115 531 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
HCH13g0115 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857(InterPro)
HCH13g0115 531 FunFam Inorganic phosphate transporter 1-6 20 526 - -
HCH13g0115 531 NCBIfam phosphate:H+ symporter 12 514 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
HCH13g0115 531 CDD MFS_PhT 25 504 - -
HCH13g0115 531 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH13g0115 531 MobiDBLite consensus disorder prediction 509 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0115 HCH-Chr13:725824 HCH5g0093 HCH-Chr5:579772 1.60E-233 dispersed
HCH13g0115 HCH-Chr13:725824 HCH5g0092 HCH-Chr5:576271 5.80E-231 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0115 K08176 - csv:101205342 854.744