Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH13g0228 | ATGGCAGCTACCAAGTTGAACACCAATCTGGACCAACAAACGACTCTCGAAACCGGCATCAAAGTCGAGGAAGAATTCGACTACACGAAGCGTGCGCAGTGGCTCCGTGCCGCCGTGCTTGGCGCCAACGACGGGCTGGTCTCGACGGCTTCTCTAATGATGGGCGTTGGAGCTGTGAAACAAGACATCAAAGCTATGATACTCACCGGGTTTGCGGGATTGGTCGCTGGGGCTTGTAGCATGGCAATAGGAGAGTTTGTTTCTGTGTACTCGCAATTGGACATTGAAGTGGCTCAAAGGAAAAGAGATAAACAAAGAAGTGGTAATACTATTTTGGATCAAGAAGCTGATCAGAAAGATAGAGATAAATTGCCAAATCCACTTCAAGCAGCAGCAGCTTCAGCTTTGGCTTTCTCTTTAGGAGCAATGGTGCCATTGCTAGCAGCTTCCTTTATAAGGAACTATAAGGTCAGACTTGGGGTGATGGTGGCCGCCGTGACCTTAGCTTTGGTGGCGTTTGGATGGTTGGGTGCTGTCTTAGGGAAAGCGCCGTTGTTTCGGTCCTCCGTGAGGGTGTTGATCGGAGGTTGGTTCGCCATGGCTATAACCTTTGGACTAACTAAGTTAATCGGATCAAGTGGACTGTCTTCTGACTCGTGA | 660 | 49.24 | MAATKLNTNLDQQTTLETGIKVEEEFDYTKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQRKRDKQRSGNTILDQEADQKDRDKLPNPLQAAAASALAFSLGAMVPLLAASFIRNYKVRLGVMVAAVTLALVAFGWLGAVLGKAPLFRSSVRVLIGGWFAMAITFGLTKLIGSSGLSSDS | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 1507423 | 1508082 | + | evm.model.ptg000021l.228 | HCH13g0228 | 556733 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH13g0228 | 219 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 12 | 212 | IPR008217 | GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER) | |
HCH13g0228 | 219 | Pfam | VIT family | 114 | 207 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) | |
HCH13g0228 | 219 | Pfam | VIT family | 35 | 114 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) | |
HCH13g0228 | 219 | CDD | Nodulin-21 | 33 | 184 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH4g1713 | HCH-Chr4:20952363 | HCH13g0228 | HCH-Chr13:1507423 | 1.70E-61 | transposed | |
HCH12g1440 | HCH-Chr12:38819917 | HCH13g0228 | HCH-Chr13:1507423 | 1.60E-76 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH13g0228 | K22736 | - | gmx:100814343 | 306.219 |