Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0281 ATGCCGTTGAAGCCTCTAAACTCCTTCACCGTCGCATTCATGATCAGTCTCGCATTATTCATCCTCTTCTTCTCCGGCTTCTTCGAATTTCCATCAGCTTCCTTCTCCATTCCCTCCTCCCACGATCTTACTTCTTCATCACTCAATTTCACTTCCGAACCTTTCACCAACTTACTCTCCGCCTTCAAAAAATGGGACTCTCAAATCGGTTGCCCTAACTTCCGCCCCAAATTTCACACCGCTCTCTCTAATTCCTCCTCCTCCTCCTCTTCTCCTTCCGATTGTGGAAAGCTTCAATTGAATCATGTTGCGGTTTTGGTTAAAGGATGGACTTGGATTCCTGATAATTTGGATAATTTATACTCTTGTTCGTGTGGATTGAGTTGTCTTTGGACTAAATCTTCTGTTCTTGCTGATAAACCTGATGCTCTGTTCTTTGAGACTTCTATGCCTCCACGGCAGAGACACAGTGGGGATCCTCTTCGTGTTTATATGGATCTTGAGGCTGGTCGGAAGCGCTCGGGTTTTGAAGATTTATTTGTTAGTTATCATGCAGAAGATGATGTTCAGACAACTTATGCGGGAGCTCTCTTTCATAATGGTCGAAATTATCATGTATCTTCATTTAAAAGCAATGATACACTTGTTTACTGGTCGTCATCCCGTTGTCTTCCACAAAGAAATCAGCTTGCTAAGAAGTTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAATGTTGGTGGCTTGGACATGGCCCTTTCTCTATACCCCGAATGTGCAAATGACGGCGACACCCCAAAATGGTGGGATCATTTGCATTGTGCAATGTCCCACTATAAATTCGTTCTGGCAATCGAAAACACGATGACTGAGAGTTACGTGACAGAGAAGCTGTTTTATGCCCTAGACTCGAGTTCAGTTCCTATTTATTTTGGTGCCCCTAACGTCTGGGATTTTGTCCCTCCGCATTCTATAATTGATGGATCTAAATTCAGCTCCTTAGAAGAATTAGCTTCCTATGTAAAGAGACTTGCCGATGACCCAGTAGCTTATGCAGAGTACCATGCATGGCGAAGATGCGGCGTTTTGGGTAACTATAGAAGAACCCGTGCTACGAGCCTCGACACATTACCATGCCGGCTGTGTGAAGCCGTTAGCAGAAAGGGTGGTAGAAATGCTTGA 1194 44.3 MPLKPLNSFTVAFMISLALFILFFSGFFEFPSASFSIPSSHDLTSSSLNFTSEPFTNLLSAFKKWDSQIGCPNFRPKFHTALSNSSSSSSSPSDCGKLQLNHVAVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALFFETSMPPRQRHSGDPLRVYMDLEAGRKRSGFEDLFVSYHAEDDVQTTYAGALFHNGRNYHVSSFKSNDTLVYWSSSRCLPQRNQLAKKFLSLLPHHSFGKCLNNVGGLDMALSLYPECANDGDTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSSSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASYVKRLADDPVAYAEYHAWRRCGVLGNYRRTRATSLDTLPCRLCEAVSRKGGRNA 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1869138 1871724 - evm.model.ptg000021l.281 HCH13g0281 556786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0281 397 FunFam Alpha-(1,4)-fucosyltransferase 162 367 - -
HCH13g0281 397 PIRSF FucT_plant 1 397 IPR017177 -
HCH13g0281 397 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 211 392 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
HCH13g0281 397 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 95 391 - -
HCH13g0281 397 Gene3D - 163 366 IPR038577 -
HCH13g0281 397 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 101 391 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0281 K14412 - csv:101216230 659.062