Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0289 ATGATGAACTCGATAGGAATCTTTGATGAAATGAGCTTTTGTAGAAACCTTGAATATTTCCCGGCACCTCCTGTGGAACAAGAGACGGCTCAGGAGCATGAACCGGAGGCTACTTTGGAGGAAGATTATAGTGATGAAGAAATGGATGTTGATGAGCTTGAGAGTAGGATGTGGAGAGACCGGATGCTTTTGAGGCGACTTAAAGAACAAACCAAAGGTAAGGAAGGGGTTGATAACACAAAGCAGCGTCAATCCCAGGAGCAGGCACGAAGGAAGAAGATGTCTCGGGCACAAGATGGCATCCTGAAATATATGTTGAAAATGATGGAGGTGTGCAAAGCTCAGGGTTTCGTTTACGGGATCATTCCTGAGAAAGGAAAGCCAGTCAGTGGAGCATCTGACAATCTTCGTGCTTGGTGGAAGGAGAAAGTAAGGTTTGATAGAAATGGCCCGGCTGCAATAGCCAAATATCAGGCTGAACATGCAATTCCTGGGCTGAATGATGACTGCAATGCAGTGACATCCACTCCTCACACTTTACAAGAGCTCCAAGACACAACCCTTGGCTCCCTGTTGTCGGCTCTGATGCAGCATTGTGATCCACCCCAGAGGCGTTTCCCATTAGAGAAGGGAGTTTCCCCACCTTGGTGGCCTACTGGGAACGAGGAATGGTGGCTTGAGTTGGGATTTCCCAAGGAACAGGGGCCTCCCCCTTACAAGAAGCCCCATGATCTGAAGAAGGCTTGGAAAGTCAGCGTGCTCACTGCTGTGATCAAGCACATGTCCCCCGACATCGCCAAGATACGTAAACTTGTTCGTCAGTCTAAATGTTTGCAAGACAAAATGACTGCAAAGGAGAGTGCTACCTGGCTGGCCATCATTAACCAGGAAGAAGCTTTGGCCAGGAAATTGTATCCTGATAGATGTCTTCCTGTGTCAATCTGTGGGACTGGCTCTATTTTAATCAATGACACTAGTGATTATGATGTTGAAGGAGTAGAAGATGATCGAAATGTTGAAGTAGAGCAAAGCAAACCTCACGATCTCAATTTTTTTAACATGGGGGCCGCTGGATCTCGGCAGATGCTTATGATGCCACCAGTGGCACCTCAGATTAAAGAAGAACTCATGGAGAATAACCAAGATTTCATACAAAAGCGGAAGCAGCTAGCTGACGAACCGAATGTAATGAGGGATCGGAAGATATATACTTGCGAGTATTCTCAATGCCCATATAACAATGACCGCCTTGGGTTTCTTGACAGAACTTCAAGAAATAACCACCAGTTGAATTGCCCATTCAGAGGTGATTCTTCCCGTATATTTGGCATCCAGAACTTTCAAATGAACAATGACAAACCACCCCCGATTCCACCGTCCTTTTCATACCCTAAGACGCCTGCTCCACCGGTGAACGAGACTCCACCATTCAGGGTATCAGGACTTGGACTTCCTGAAGATGGGCAGAAAATGATTTCTGAGCTTCTGAGTTTCTATGACACTAATCTTCAACATGACAAAAATTTGAATTCTGGGAGCATCGATGCTAGAGAGGATCACAATCAACAGCCACACAAGTTTCAACTTCAAGTTGATGATAATTTATATAACCAAGGGGCAGTTGTGGGAAGTAGTAGCATGCCAATGCAGCACACGGACTTCTCTTCAACAAAAGTTCAATTCGACGAGTACAAAGCGTTGGATTCTGCATTCGGCATCTATCCCAACGACAATATCTCAGACTTCAGATTTGGTTCTCCATTTAACTTGGCATCAATTGATTATGCAATGGACCCACAATTGCCCAAGCAAGATACACCCTTGTGGTACATGTGA 1836 45.42 MMNSIGIFDEMSFCRNLEYFPAPPVEQETAQEHEPEATLEEDYSDEEMDVDELESRMWRDRMLLRRLKEQTKGKEGVDNTKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQAEHAIPGLNDDCNAVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWLELGFPKEQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARKLYPDRCLPVSICGTGSILINDTSDYDVEGVEDDRNVEVEQSKPHDLNFFNMGAAGSRQMLMMPPVAPQIKEELMENNQDFIQKRKQLADEPNVMRDRKIYTCEYSQCPYNNDRLGFLDRTSRNNHQLNCPFRGDSSRIFGIQNFQMNNDKPPPIPPSFSYPKTPAPPVNETPPFRVSGLGLPEDGQKMISELLSFYDTNLQHDKNLNSGSIDAREDHNQQPHKFQLQVDDNLYNQGAVVGSSSMPMQHTDFSSTKVQFDEYKALDSAFGIYPNDNISDFRFGSPFNLASIDYAMDPQLPKQDTPLWYM 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1915070 1916905 - evm.model.ptg000021l.289 HCH13g0289 556794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0289 611 MobiDBLite consensus disorder prediction 25 51 - -
HCH13g0289 611 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 605 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
HCH13g0289 611 Gene3D - 175 308 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
HCH13g0289 611 FunFam Ethylene insensitive 3-like 1 83 161 - -
HCH13g0289 611 MobiDBLite consensus disorder prediction 69 95 - -
HCH13g0289 611 Coils Coil 373 393 - -
HCH13g0289 611 Gene3D - 83 163 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
HCH13g0289 611 FunFam Ethylene insensitive 3-like 1 171 308 - -
HCH13g0289 611 Pfam Ethylene insensitive 3, DNA-binding domain 51 298 IPR047091 GO:0003700(InterPro)
HCH13g0289 611 Coils Coil 36 56 - -
HCH13g0289 611 SUPERFAMILY DNA-binding domain of EIN3-like 177 301 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0289 HCH-Chr13:1915070 HCH8g0502 HCH-Chr8:41736719 2.10E-208 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32784 PF04873 EIN3 7.30E-131 No_clan HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0289 K14514 - csv:101214396 1038.1