Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH13g0340 | ATGGCAATGGCATCTTCCTCTTCAATTCCCTTTGATCCTTACCTTCTTCTAGCTGCTTCCATAGCTCTCTCAATCTCCACGTTAATTTACCTTCTTACCCTTAAAACCAATTCAAAGAAACCCAATCTCCCTCCCGGGCCTCCGGGTTGGCCCATCGTCGGTAACCTCTTTCAAGTAGCCCGCTCCGGAAAACACTTCTTCGAATACATAGAAGACATCCGACAAATTTACGGTTCCATTTTTACCCTCAAAATGGGTTCCCGGACTCTCATCATTTTATCCGACCCGAACATCATCCACGAAGCTTTGATTAAACGCGGCTCCACATTCGCTAGCCGCCCGACTGAAAACCCGACCCGAATCATTTTTAGCAGTAACAAATTCTCCGTTAACGCCGCCGTGTACGGCCCCGTTTGGCGGTCTCTTCGCCGGAATATGGTCGAGAATATGCTCTGCTCTAGCCGGTTAAAGGAATTTCGCGACGTCAGAAAAAACGCGATGGAGAAACTTATCGAACGGATTCGTACGGAAGCTGACGGCGAAGACGGCGCCGTGATGGTTTTGAAAAATTCACGATTCGCGGTTTTTTGTATTCTCTTAGCGATGTGTTTTGGTCAAGAAATGGAAGAGGAAACCGTTGAGAAAATGGATCAAATTTTGAAAACCGTTTTGATCACTGTTGATCCAAGGCTTGATGATTTTCTTCCGATTTTGAGTCCGTTTTTTAAAAAACAAAGAAATCGCGCCATGAAAGTAAGAAACGAACAGATTGAATTCGTCGTTCAATTTATCAATAATCGAAGAAAAGCAATCGCGAATCCAGGTTCAGATAAAAACGCTACTTCGTTCTCATATCTAGACACGCTTTTCGATCTCAAAATCGACGGCAGGAAATCCTCTCCGACGGATGCGGAATTAGTCACTCTCTGCTCGGAGTTTCTCAACGGCGGTACCGATACGACAGCAACCGCAATCGAATGGGGAATCGCGGAGCTGATTGCGAATCCGGAGATTCAGAATAAATTACACAGCGAGATCAAAGGAATAACCGGCGATCGGAAAGTCGACGAAACAGACGTCGAGAAAATGCCGTATTTACAAGCTGTAGTGAAGGAGTTGCTGAGAAAGCATCCGCCGACGTATTTTTCATTGACGCATTCGGTGATCGAACCGACGAAATTAGCCGGATACGACATTCCGATCGATGCGAATGTGGAGGTATATTTAGCAGGGATCAGTAACGATCCAAAGTTGTGGAAGAATCCAGAAAAATTTGATCCAGAAAGATTCATAAACGGCGATGAAGAAGCAGATATAACAGGAATTAACGGATTGAAAATGATTCCATTTGGAGTTGGAAGGAGGATTTGTCCTGGTTTAGGAATGGCTACGATTCATCTTCATCTGATGCTTGCTAGATTGGTACAAGAATTTGAATGGTCTTCTTTTCCATCGAATCGTGATTTGGATTTCACCAAGAGATATCAGTTTACTGTTATCATGAAGAATCCTCTGAGAGCCATTGCTAAAACCAGAGTTTGA | 1542 | 44.1 | MAMASSSSIPFDPYLLLAASIALSISTLIYLLTLKTNSKKPNLPPGPPGWPIVGNLFQVARSGKHFFEYIEDIRQIYGSIFTLKMGSRTLIILSDPNIIHEALIKRGSTFASRPTENPTRIIFSSNKFSVNAAVYGPVWRSLRRNMVENMLCSSRLKEFRDVRKNAMEKLIERIRTEADGEDGAVMVLKNSRFAVFCILLAMCFGQEMEEETVEKMDQILKTVLITVDPRLDDFLPILSPFFKKQRNRAMKVRNEQIEFVVQFINNRRKAIANPGSDKNATSFSYLDTLFDLKIDGRKSSPTDAELVTLCSEFLNGGTDTTATAIEWGIAELIANPEIQNKLHSEIKGITGDRKVDETDVEKMPYLQAVVKELLRKHPPTYFSLTHSVIEPTKLAGYDIPIDANVEVYLAGISNDPKLWKNPEKFDPERFINGDEEADITGINGLKMIPFGVGRRICPGLGMATIHLHLMLARLVQEFEWSSFPSNRDLDFTKRYQFTVIMKNPLRAIAKTRV | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 2281347 | 2282888 | - | evm.model.ptg000021l.340 | HCH13g0340 | 556845 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH13g0340 | 513 | CDD | CYP77_89 | 76 | 506 | - | - | |
HCH13g0340 | 513 | Gene3D | Cytochrome P450 | 31 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | Pfam | Cytochrome P450 | 44 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | SUPERFAMILY | Cytochrome P450 | 44 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
HCH13g0340 | 513 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 23 | 511 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
HCH13g0340 | 513 | FunFam | Cytochrome P450 family protein | 37 | 513 | - | - | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 194 | 212 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 98 | 119 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0340 | 513 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH13g0340 | HCH-Chr13:2281347 | HCH2g0356 | HCH-Chr2:45288194 | 1.10E-96 | dispersed | |
HCH14g0829 | HCH-Chr14:36200641 | HCH13g0340 | HCH-Chr13:2281347 | 8.30E-126 | transposed | |
HCH1g0727 | HCH-Chr1:56086021 | HCH13g0340 | HCH-Chr13:2281347 | 3.30E-207 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH13g0340 | K21995 | - | csv:101206763 | 788.104 |