Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH13g0471 | ATGGCGGGAAACGGTGAAGGTCCAGCGATCGGAATCGATCTTGGAACGACTTATTCGTGTGTAGGAGTGTGGCAACATGATCGTGTTGAGATCATTGCCAATGATCAAGGCAATAGAACGACGCCGTCTTATGTTGCTTTCACTGATACTGAACGTTTGATTGGCGATGCTGCTAAGAATCAGGTTGCTATGAATCCATTGAACACCGTTTTTGATGCAAAGCGGTTGATTGGGAGGAGATTTTCTGATCCATCTGTTCAGAGCGATATAAAGCTATGGCCATTCAAGGTCATCGCCGGTCCGAGCGATAAACCGATGATCGTTGTGAACTACAAAGGTGAAGAAAAGCAATTTTCTGCCGAGGAAATATCGTCGATGGTCCTCGTAAAAATGCGCGAAATTGCGGAAGCTTATCTTGGTACTGATATAAAGAATGCTGTTGTTACTGTCCCTGCTTACTTCAATGACTCTCAGCGCCAGGCTACGAAGGATGCTGGGGTCATTGCCGGCCTTAACGTGCTTCGTATCATCAACGAGCCTACTGCTGCGGCCATAGCTTATGGCCTTGATAAGAAAGCAACTAGTGTTGGGGAGAAAAATGTTTTGATTTTTGATTTGGGTGGAGGGACTTTTGATGTGTCTCTCTTGACAATTGAGGAAGGGATTTTCGAAGTGAAGGCGACGGCCGGGGACACCCATTTGGGAGGTGAGGATTTCGACAATAGGTTGGTTAATCACTTTGTTCAGGAATTCAAGAGGAAGCACAAGAAGGATATTAGTGGAAATCCGAGGGCTCTTAGGAGGTTGAGAACTGCTTGTGAGAGAGCCAAGAGGACTCTTTCATCTACGGCACAAACGACGATTGAGATCGACTCGTTGTATGAGGGAATCGATTTCTACTCGACCATTACTCGTGCTAGATTTGAGGAGATGAATATGGATCTCTTCAGGAAGTGTATGGAGCCAGTTGAGAAGTGTTTGAGAGATGCTAAGATGGATAAAAGCACTGTTCATGATGTTGTTCTTGTTGGTGGCTCGACAAGGATTCCTAAGGTGCAACAGCTTTTGCAGGATTTCTTCAATGGCAAAGAGCTCTGCAAGAGTATCAATCCTGACGAGGCAGTTGCTTATGGAGCTGCTGTGCAAGCTGCAATATTGAGTGGTGAAGGAAATGAGAGAGTTCAGGATCTTTTGCTCTTGGATGTTACTCCTCTGTCCCTTGGTTTGGAGACTGCAGGAGGTGTGATGACTGTTCTGATTCCAAGGAATACGACCATTCCGACGAAGAAGGAGCAGGTCTTTTCGACTTATTCGGATAATCAACCTGGGGTTCTTATCCAGGTCTATGAGGGTGAAAGGACAAGAACCAAAGATAACAATTTATTGGGCAAGTTCGAGCTTTCTGGTATCCCTCCAGCTCCCAGAGGTGTCCCGCAGATCAACGTCTGCTTCGACATTGATGCTAACGGTATCCTAAATGTTTCCGCTGAGGACAAGACCACAGGACAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCTAAAGAGGATATCGAGAAGATGGTCCAGGAAGCAGAGAAATACAAGGCTCAGGATGAGGAACACAAGAAGAAAGTAGATGCGAAAAATGCATTGGAGAATTATGCCTACAACATGAGGAACACCATCAAAGATGAAAAGATCGGTGGTAAGCTTGCCCCAGGTGACAAGAAAAAGATAGAGGATGCTGTTGAACAAGCCATTCAATGGCTAGATGGTAACCAGTTAGCAGAGGCTGATGAGTTTGAAGATAAGATGAAGGAACTTGAAAGCCTTTGCAACCCCATCATAGCCAAGATGTATCAAGGTAGTGGTGGTGACATGGGCGGTGCTGCTATGGATGGCGATTTTCCTGGTGCTAGCGGTGGCGGCAGTGGTGGTGCTGGTCCTAAAATTGAAGAAGTTGATTAA | 1959 | 45.69 | MAGNGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIAGPSDKPMIVVNYKGEEKQFSAEEISSMVLVKMREIAEAYLGTDIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNERVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAQDEEHKKKVDAKNALENYAYNMRNTIKDEKIGGKLAPGDKKKIEDAVEQAIQWLDGNQLAEADEFEDKMKELESLCNPIIAKMYQGSGGDMGGAAMDGDFPGASGGGSGGAGPKIEEVD | 652 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 3261085 | 3263319 | - | evm.model.ptg000021l.471 | HCH13g0471 | 556976 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH13g0471 | 652 | MobiDBLite | consensus disorder prediction | 623 | 652 | - | - | |
HCH13g0471 | 652 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
HCH13g0471 | 652 | FunFam | Heat shock 70 kDa protein | 71 | 126 | - | - | |
HCH13g0471 | 652 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - | |
HCH13g0471 | 652 | FunFam | Heat shock 70 kDa | 235 | 318 | - | - | |
HCH13g0471 | 652 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 622 | IPR029048 | - | |
HCH13g0471 | 652 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 545 | IPR029047 | - | |
HCH13g0471 | 652 | FunFam | Heat shock cognate 70 kDa protein 2 | 319 | 366 | - | - | |
HCH13g0471 | 652 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
HCH13g0471 | 652 | Gene3D | - | 192 | 366 | - | - | |
HCH13g0471 | 652 | SUPERFAMILY | Actin-like ATPase domain | 198 | 388 | IPR043129 | - | |
HCH13g0471 | 652 | FunFam | Heat shock 70 kDa | 391 | 545 | - | - | |
HCH13g0471 | 652 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
HCH13g0471 | 652 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
HCH13g0471 | 652 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
HCH13g0471 | 652 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 9 | 582 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro) | |
HCH13g0471 | 652 | Gene3D | - | 71 | 126 | - | - | |
HCH13g0471 | 652 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
HCH13g0471 | 652 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
HCH13g0471 | 652 | Gene3D | - | 10 | 384 | - | - | |
HCH13g0471 | 652 | FunFam | Heat shock 70 kDa protein | 539 | 652 | - | - | |
HCH13g0471 | 652 | FunFam | Heat shock protein 70 | 10 | 196 | - | - | |
HCH13g0471 | 652 | Coils | Coil | 521 | 541 | - | - | |
HCH13g0471 | 652 | FunFam | Heat shock 70 kDa protein | 197 | 260 | - | - | |
HCH13g0471 | 652 | Gene3D | - | 546 | 619 | IPR029048 | - | |
HCH13g0471 | 652 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 340 | 354 | IPR018181 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0203 | HCH-Chr11:1912135 | HCH13g0471 | HCH-Chr13:3261085 | 0.00E+00 | dispersed | |
HCH13g0471 | HCH-Chr13:3261085 | HCH6g1173 | HCH-Chr6:46205040 | 5.30E-218 | dispersed | |
HCH13g0464 | HCH-Chr13:3227664 | HCH13g0471 | HCH-Chr13:3261085 | 0.00E+00 | proximal | |
HCH11g0951 | HCH-Chr11:40906720 | HCH13g0471 | HCH-Chr13:3261085 | 1.40E-157 | transposed | |
HCH5g0656 | HCH-Chr5:4740164 | HCH13g0471 | HCH-Chr13:3261085 | 4.70E-230 | transposed | |
HCH7g1200 | HCH-Chr7:44902576 | HCH13g0471 | HCH-Chr13:3261085 | 9.80E-75 | transposed | |
HCH8g0108 | HCH-Chr8:4325933 | HCH13g0471 | HCH-Chr13:3261085 | 1.40E-226 | transposed | |
HCH8g0950 | HCH-Chr8:45700451 | HCH13g0471 | HCH-Chr13:3261085 | 3.4e-313 | transposed | |
HCH13g0471 | HCH-Chr13:3261085 | HCH9g0659 | HCH-Chr9:4384754 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH13g0471 | K03283 | - | vvi:100265651 | 1192.56 |