Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH13g0615 | ATGGCCATGGCGGCGGCGGCGGCGGCGATGGTTTCGACTCTGGTTTTGGCAGCCATGACGGTGTTTATATTGAGCGTTGCTTATGAAACAATCTCATGTTATTTGTTAACTCCAAGACGCATCAAGAAGACAATGGAAAAGCAAGGCGTGCGTGGCCCCAAACCTCGTTTTCTCCTTGGCAACATCTTGGACGTCGCTTCTTTCCTTTCTAAATCCACCTCCCATCCCTTTTCTTCCATCTCCCATGACATTGTTCCTCGTCTTCTCCCTCATTATCTCGCTTGGTCTAAACATTTCGGAAAAAGATTCATTTTCTGGAATGGGACAGAACCCAGAATGTGTTTGGCTGAGACAGGTTTAATCAAAGAGCTTCTTTCAAAGTACAGCACCGTGTCTGGAAAATCGTGGCTTCAACAACAAGGCTCCAAACACTTCATAGGCCGTGGTCTCTTAATGGCTAACGGCCAGAACTGGTATCATCAACGCCACATCGTAGCACCCGCCTTCATGGGAGATAAACTCAAGAGTTATGCTGGATATATGGTGGAGTGTACAAAGGAGATGCTCCAATCGATAGAGAACGAGGTGAAATCGGGTCGATTCGAGTTCGAAATCGGCGATTATATGACCAGACTTACTGCTGATATTATAGCAAGAACTGAGTTTGAAAGTAGCTATGAAAAGGGAAAACAAATCTTCCATTTACTCACTGTTTTGCAAAATCTTTGTGCTCAGGCCAGCCGCCATCTCTGCCTTCCCGGAAGCCGGTTTTTTCCAAGCAAATATAACAGAGAAATAAAGACATTAAAGATGGAGGTGGAGAAGTTATTAATGGAGATAATACAAAGGAGGAAAGATTGTGTGGAGATTGGTAGGAGCAGTTGTTATGGAAACGACTTGTTGGGAATGTTACTAAATGAGATGCAGAAGAAGAAATTAGGAGGCGGCCATGGATGGAGCTTGGATTTGCAGATTATAATGGATGAATGCAAGACCTTCTTCTTCGCTGGCCATGAAACCACTGCTCTTTTACTCACATGGACCATCATGTTATTAGCCACTAACCCTTCTTGGCAACAAAGAGTTCGAAACCAAGTTAAAGAGGTCTTCAATGGTGGAACTCCCTCTGTTGATCATCTCTCCAAACTCACTCTGTTAAATATGGTGATAAATGAATCACTGAGGCTTTATCCACCAGCAACAATTCTACCAAGAATGGCATTTGAAGACATAAAACTAGGAGATCTCCACATCCCAAAAGGACTTTCAATATGGATTCCAGTTCTCGCAATTCATCACAGTGAAGAATTATGGGGAAAAGATGCAAATGAATTCAACCCAGAGAGATTTGCTTCAAAATCTTTCACTCCAGGAAGATTCATTCCCTTTGCATCAGGCCCTCGTAATTGCATAGGCCAAGCTTTTGCTCTAATGGAAACCAAGATCATATTAGCAATGTTAATCTCCAAGTTTAGCTTCATAATCTCTGAGAATTATCGCCATGCACCCATTGTCGTGCTCACGTTAAAGCCCAAGTATGGCGTCCAAGTATGCTTGAAGGCCTTGGAATTGGATTAA | 1578 | 43.09 | MAMAAAAAAMVSTLVLAAMTVFILSVAYETISCYLLTPRRIKKTMEKQGVRGPKPRFLLGNILDVASFLSKSTSHPFSSISHDIVPRLLPHYLAWSKHFGKRFIFWNGTEPRMCLAETGLIKELLSKYSTVSGKSWLQQQGSKHFIGRGLLMANGQNWYHQRHIVAPAFMGDKLKSYAGYMVECTKEMLQSIENEVKSGRFEFEIGDYMTRLTADIIARTEFESSYEKGKQIFHLLTVLQNLCAQASRHLCLPGSRFFPSKYNREIKTLKMEVEKLLMEIIQRRKDCVEIGRSSCYGNDLLGMLLNEMQKKKLGGGHGWSLDLQIIMDECKTFFFAGHETTALLLTWTIMLLATNPSWQQRVRNQVKEVFNGGTPSVDHLSKLTLLNMVINESLRLYPPATILPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFASKSFTPGRFIPFASGPRNCIGQAFALMETKIILAMLISKFSFIISENYRHAPIVVLTLKPKYGVQVCLKALELD | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 4703167 | 4706536 | - | evm.model.ptg000021l.615 | HCH13g0615 | 557120 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH13g0615 | 525 | SUPERFAMILY | Cytochrome P450 | 75 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | E-class P450 group I signature | 212 | 230 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | E-class P450 group I signature | 428 | 452 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | E-class P450 group I signature | 460 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | E-class P450 group I signature | 345 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | E-class P450 group I signature | 325 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | E-class P450 group I signature | 96 | 115 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | E-class P450 group I signature | 470 | 493 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | Pfam | Cytochrome P450 | 96 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | Gene3D | Cytochrome P450 | 34 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | P450 superfamily signature | 470 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | P450 superfamily signature | 461 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | P450 superfamily signature | 336 | 353 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PRINTS | P450 superfamily signature | 388 | 399 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH13g0615 | 525 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 21 | 515 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH13g0615 | HCH-Chr13:4703167 | HCH9g0863 | HCH-Chr9:6169169 | 1.10E-96 | dispersed | |
| HCH1g0254 | HCH-Chr1:41739573 | HCH13g0615 | HCH-Chr13:4703167 | 1.80E-83 | wgd | |
| HCH13g0615 | HCH-Chr13:4703167 | HCH9g0365 | HCH-Chr9:2261358 | 3.80E-243 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH13g0615 | K10717 | - | mdm:103442522 | 874.004 |