Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0619 ATGGCGGTTCCCGTGGTTAGGTTTCCGATATTTCTGATTGTGAGAGTGATCGGAATGATTGTTGCATCTCTGCTTTTCATTTGGACGTTGCATTTCCGTGGAGGATTGGCACTTATCTCAGACAACAAAGATCTGATTTTCAATGTCCATCCTGTTCTAATGGTGATCGGGCTTATACTTCTGAATGGTGAAGGAATGCTAGCATACAAGACAGTTTCAGGAACAAAAAACTCACGAAAGTTGGTTCATCTTACACTACAGTTCATCGCGTTCTTTTTAAGCCTGATCGGTGTATGGGCTGCTCTGAAGTTCCACAATGACAAAGGAATTGACAACTTCTACAGTCTGCATTCTTGGTTGGGCTTACTTTGTCTCTTTCTGTTCGGCATCCAGTGGGCTGCAGGATTTGTAACTTTTTGGTACCCAGGTGGCTCCAGAAACCGCAGAGCTACTTTGCTGCCATGGCATGTTTTCTTTGGCGTTTATATATATGCCCTTGCTATTGCCACTGCCACTACTGGATTGTTGGAAAAAGCCACATTTCTCCAAATCAACAAGGTAATATTACGCTATTCAACCGAGGCTTTGCTAGTAAATTCATTGGGTATCCTGATTGTTGCTCTGGGTGGTTTCGTAATTCTTGCGGTCGTAACTCCCTCCAACGGTAAAGGTGATATTTTCAGAGGGCCAACGGAATAG 699 43.63 MAVPVVRFPIFLIVRVIGMIVASLLFIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLILLNGEGMLAYKTVSGTKNSRKLVHLTLQFIAFFLSLIGVWAALKFHNDKGIDNFYSLHSWLGLLCLFLFGIQWAAGFVTFWYPGGSRNRRATLLPWHVFFGVYIYALAIATATTGLLEKATFLQINKVILRYSTEALLVNSLGILIVALGGFVILAVVTPSNGKGDIFRGPTE 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 4792997 4795346 + evm.model.ptg000021l.619 HCH13g0619 557124
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0619 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
HCH13g0619 232 ProSiteProfiles Cytochrome b561 domain profile. 13 217 IPR006593 -
HCH13g0619 232 PANTHER CYTOCHROME B561-RELATED 1 221 IPR043205 GO:0016491(PANTHER)|GO:0016491(InterPro)
HCH13g0619 232 SMART 561_7 49 175 IPR006593 -
HCH13g0619 232 FunFam Cytochrome b reductase 1 4 225 - -
HCH13g0619 232 CDD Cyt_b561_ACYB-1_like 40 183 - -
HCH13g0619 232 Gene3D - 1 229 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0619 HCH-Chr13:4792997 HCH5g0799 HCH-Chr5:6129590 2.00E-50 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0619 K08360 - csv:101212633 391.349