Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH13g0666 | ATGGGTGTTTTAATGGTGATTTTTGTGGTCTTGGTTTTGGTTATTTGTTTGTGTTCTGCTTTGCTGAGATGGAATGAGGTCAGGTTTAGGAACAAAGGGTTGCCTCCTGGTACGATGGGTTGGCCTGTTTTTGGAGAAACTACTGAGTTTCTTAAACAAGGTCCCAACTTTATGAAAAATCAGAGAGCAAGGTATGGAAGTTTTTTCAAATCCCACATTCTGGGTTGTCCAACAATTATATCAATGGATCCAGAGGTGAACAGATATATTCTAATGAATGAATCGAGAGGTCTGGTTCCTGGGTACCCTCAGTCCATGCTTGATATTCTTGGGAAATGCAACATTGCTGCTGTCCATGGCACCCCCCACAGGCTCATGAGAGGAGCTCTCCTTGCCAGCATCAGCCCCATCATGATCAAAGATAGACTTTTGCCTAAAATTGATTCTTTTATGAGAACCCATTTGAGTAACTGGGAAAACAAAATCATCAATATCCAAGACAAGACCAAAGAGATGGCTATTCGTTCTTCTCTCAAGCAAGTTGCTGGCTTAGATTATGGTCCATTATCTGATTCATTTGTCACTGAGTTCTTCAAGCTTGTTGTTGGCACTATTTCCTTGCCTATTGATTTTCCCGGCACCGATTATCGCCGTGGAATTGATGCAAGAAAGAACATACTTAAACTTCTGGAGAAGCATATAAAAGAAAGAAGAGGATCAGGGGAAATGCATTATGACATGCTTGGATATTGGATGTGTGAGGAAGATGATAAATATAAGCTTAATGATGAACAAATTATTGATCAGATTATCACTGTTATGTATTCTGGTTATGAAACTGTTTCTGCTACTTCTATGATGGCTGTCAAATACCTCCATGACAATCCCAAATTTCTTCAACAATTGAGAGAAGAGCAATTTGCAATCAGAGAGAAGAAAAATCCTGAGGACCCAATTGGATGGGATGATATTAAAGCGATGAAATTCACTCGTGCGGTGGTATTTGAAACATCAAGAATGGCCACAATTGTTAATGGGGTGTTGAGAAAGACTACCAAGGATTTAGAACTTAATGGATTTGTGATTCCAAAAGGATGGAGGATATATGTGTATACAAGAGAGATAAACTATGACCCTTTTCTCTATTCTGAGCCTTTGACCTTCAACCCATGGAGATGGATGGACAAAAACTTGGAGTCTCATAATTACTTCTTCATGTTTGGAGGGGGCACAAGGCTTTGCCCTGGGAAAGAGTTGGGAATTGCAGAAATTGCTACTTTTCTACATTACTTTGTAACTAAATACAGGTGGGAAGAAGTTGGAGGAGACAAGCTGATGAAATTTCCAAGAGTTGAAGCCCCAAGTGGGCTCCACATTAGGGTTTCATCTTACTGA | 1395 | 39.93 | MGVLMVIFVVLVLVICLCSALLRWNEVRFRNKGLPPGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIISMDPEVNRYILMNESRGLVPGYPQSMLDILGKCNIAAVHGTPHRLMRGALLASISPIMIKDRLLPKIDSFMRTHLSNWENKIINIQDKTKEMAIRSSLKQVAGLDYGPLSDSFVTEFFKLVVGTISLPIDFPGTDYRRGIDARKNILKLLEKHIKERRGSGEMHYDMLGYWMCEEDDKYKLNDEQIIDQIITVMYSGYETVSATSMMAVKYLHDNPKFLQQLREEQFAIREKKNPEDPIGWDDIKAMKFTRAVVFETSRMATIVNGVLRKTTKDLELNGFVIPKGWRIYVYTREINYDPFLYSEPLTFNPWRWMDKNLESHNYFFMFGGGTRLCPGKELGIAEIATFLHYFVTKYRWEEVGGDKLMKFPRVEAPSGLHIRVSSY | 464 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5296722 | 5299602 | - | evm.model.ptg000021l.666 | HCH13g0666 | 557171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH13g0666 | 464 | Gene3D | Cytochrome P450 | 25 | 462 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0666 | 464 | PANTHER | CYTOCHROME P450 26 | 34 | 435 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
HCH13g0666 | 464 | SUPERFAMILY | Cytochrome P450 | 28 | 444 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0666 | 464 | Pfam | Cytochrome P450 | 35 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0666 | 464 | CDD | CYP90-like | 61 | 462 | - | - | |
HCH13g0666 | 464 | FunFam | Cytochrome P450 85A1 | 25 | 463 | - | - | |
HCH13g0666 | 464 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 407 | 416 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
HCH13g0666 | 464 | PRINTS | E-class P450 group I signature | 414 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0666 | 464 | PRINTS | E-class P450 group I signature | 331 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0666 | 464 | PRINTS | E-class P450 group I signature | 371 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0666 | 464 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH13g0666 | 464 | PRINTS | E-class P450 group I signature | 404 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH13g0666 | HCH-Chr13:5296722 | HCH1g0373 | HCH-Chr1:51158760 | 5.90E-78 | dispersed | |
HCH13g0666 | HCH-Chr13:5296722 | HCH4g1474 | HCH-Chr4:11150924 | 2.20E-85 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH13g0666 | K09590 | - | csv:101206858 | 791.186 |