Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0796 ATGGTTGAAGATTCACAAGAGATGAGATCTTTGGCTTTGACTCCCACTTGGTCTGTTGCTTCTGTCTTGACTATTTTTGTTGCTGTCTCATTGCTTGTTGAACGCTCCATTCATCGCCTAAGCTCTTGGTTGGGGAAAACTCATAGAAAACCATTGTTTGAGGCATTGGAGAAAATGAAAGAAGAGTTAATGCTGCTTGGATTTATTTCGCTCCTTTTAACAGCTACTTCAAGATTGATAGCGAATATCTGTATCCCATCAAAGTTATATGATACCCCTTTTACTCCATGCACCAAATCTGAGATTGATGAACAACAAGAGAACAGTTCATCTGAGGGACGGAAACTTTTTACGGTTTCTGTTCTACCCCATTTGCTTAGGAGGGTGCTTAACGAGAATAAGAATACCTGCAAAGAGGGTCATGAGCCTTTTGTTTCATATGAGGGTCTTGAGCAATTGCATCGCTTTATCTTTGTAATGGCAGTAACTCACATATCTTATAGCTGCTTAACAATGTTACTGGCAATTGTGAAGATTCACAGATGGAGAGCATGGGAGGATGAAGCCCGCATGGATAGGCATGATTCATTGAATGATATCACACGAGAAATGACAATTCGGAGGCAATCGACCTTTGTTCAATATCAAACTTCAAATCCTTTGACCAGGAACAGTTTTCTTATTTGGGTGATATGTTTCTTCCGGCAATTTGGAAATTCTGTGGTTCGTGCTGACTATCTCACACTCCGCAAGGGCTTCATCATGAATCACCACCTCTCATTAACATATGACTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCAAAAGGATAGTTGGTGTGAGTGCTCCACTGTGGGGATTCGTTGTTGCTTTCATGCTGTTTAACATAAAAGGGTCTAATCTATATTTCTGGATAGCAACCATTCCCATTACTGTTGTTCTGTTTGTGGGCACAAAGTTGCAGCATGTTATTGCAACCTTGGCATTGGAGAATGCTGGAATAACGGGTTCCTTTGCTGGTGCAAAGCTAAAGCCCCGAGACGATCTTTTCTGGTTTAAGAAGCCCGAACTCCTGTTATCTTTGATCCACTTTATTCTGTTTCAGAATGCATTCGAATTGGCGTCATTCTTCTGGTTTTGGTGGCAATTTGGATACAATTCCTGCTTTATTAGGAATCATCTTCTTGTTTATGCAAGACTCGTCTTGGGATTTGCTGGACAGTTTCTTTGCAGCTACAGCACCTTGCCCCTATATGCTCTGGTAACCCAGATGGGAACTAACTACAAGGCTGCCTTAATTCCACAAAGAATAAGGGAAACAATCCATGGATGGGGTAAGGCCGCAAGAAGGAAGAGAAGGCTTCGAGTATTCACTGACGATGCCACGATTCACACAGAAACGAGCACAGTGATGTCACTTGAGGATGACGACCATCTGCTTATTGATACTCCTGGAACTACCATTGGCTATACAGACATCGAGCTCCAGCGAACTGCTATAACAAATGTACCTGCCCCTGTTGCTAATGAAAGGTTAAGCAGATTTGGCAGAAACCTTCTACAGCCCTCTGCATCTCTCTCTTCACCAATTGATCAGAAATTAGAGGTGGAGAGTTTTATTAGAAGCTCTTCCATGCCAATCAGAAGATAG 1659 42.13 MVEDSQEMRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSSWLGKTHRKPLFEALEKMKEELMLLGFISLLLTATSRLIANICIPSKLYDTPFTPCTKSEIDEQQENSSSEGRKLFTVSVLPHLLRRVLNENKNTCKEGHEPFVSYEGLEQLHRFIFVMAVTHISYSCLTMLLAIVKIHRWRAWEDEARMDRHDSLNDITREMTIRRQSTFVQYQTSNPLTRNSFLIWVICFFRQFGNSVVRADYLTLRKGFIMNHHLSLTYDFHSYMIRSMEEEFKRIVGVSAPLWGFVVAFMLFNIKGSNLYFWIATIPITVVLFVGTKLQHVIATLALENAGITGSFAGAKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHLLVYARLVLGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRVFTDDATIHTETSTVMSLEDDDHLLIDTPGTTIGYTDIELQRTAITNVPAPVANERLSRFGRNLLQPSASLSSPIDQKLEVESFIRSSSMPIRR 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7660504 7668670 + evm.model.ptg000021l.796 HCH13g0796 557301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0796 552 PANTHER MLO-LIKE PROTEIN 1 3 464 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH13g0796 552 Pfam Mlo family 9 465 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g1081 HCH-Chr12:8186378 HCH13g0796 HCH-Chr13:7660504 4.90E-265 dispersed
HCH13g0796 HCH-Chr13:7660504 HCH13g1347 HCH-Chr13:41357086 1.60E-103 dispersed
HCH13g0796 HCH-Chr13:7660504 HCH2g1166 HCH-Chr2:54237510 6.70E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0796 K08472 - csv:101217434 936.406