Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0797 ATGGCTCCAAATTCTGTTGTTGTAACAATTGAGAAACACAACACTTTTCCTTTACTTGAAATCAATGGCTCTGATTCATTGTTGCTTTCTGAGAAACATAAAGCTGCAAGTCCTAAGCAGCTTACTTGGGTTCTTTTTCTCAAAGCTCATAAAGCTTTCTTTTTCTTTTCATGGTTAGCTTTAGCTACTAAAACTGTTTTTGCTTTGGCTAAGAAACGCATTGCTTATGCTGATATTAATGAAGAGGACCCTAAAAGCAAAGGGAAGAGACTGTATAGATTTCTTAAAGCTTTTCTAGCTATTTCTATTGCTGCTCTTGTCATTGAAATCTTTGCCCATTTGAAGAAATGGAATTTGGGATTGGTTAAGCCTTGGCAATTTGAAGTTCATGGGGTTCTTGAGTGGTTTTATATGTTGTGGATGTCATTTAGAGTTGATTATGTTGCTCCTTTGGTTATATTGCTTTCTAAATTCTGCATTGTTTTGTTCTTGATTCAATCGCTCGACCGCCTTGTTCTTTGTATCGGGTGTTTTTGGATTAAGTATAAGAAGTTGAAACCAATGATTCAAGGAGAGGAGTATGATTGTGAAGATCCTTCAAGTTTCCCTATGGTTCTTGTTCAAATTCCAATGTGCAATGAGAGAGAGGTGTATGCACAATCAATTGCTGCTGCTTGTGAGCTTGATTGGCCGAGGAACCGGGTCTTAATTCAAGTCCTAGACGATTCGGACGATGGGAATCTTCAGAATTTAATCAGAGAGGAAGTTTTGTCATGGAATGAGAAGGGAGTCAATATAGTGTATAGACATAGATTGATTCGAACCGGGTACAAAGCTGGGAATCTCAAGTCTGCTATGGAATGTGATTATGTTAAAGATTATGAATTTGTAGCAATTTTAGATGCAGATTTCCAGCCAAATCCTGATTTCCTTAAACAGACTGTCCCCCATTTCAAGGGAAATCCTGAACTGGGTCTTGTCCAGGCTAGATGGACGTTTGTTAACAAGGATGAAAATTTACTTACAAGACTCCAAAACATCAATTTGTGCTTCCATTTTGAAGTGGAACAGCAAGTTAATGGGGTTTTCCTGAATTTCTTTGGATTCAATGGAACGGCAGGCGTTTGGAGAGCTAAAGCTCTTGAGGAATCAGGTGGCTGGCTCGAGAGGACAACGGTGGAAGACATGGACATTGCAGTTCGAGCTCACTTGAATGGTTGGAAATTTGTCTTCCTCAATGATGTTAAGGTGCTATGCGAATTGCCTGAATCATATGAAGCTTATAAGAAACAGCAACATCGATGGCATTCCGGTCCTATGCAGCTCTTCAGATTATGCCTTCCTGATATCATTACTTCAAAGATATCAAAATGGAAGAAGGCCAACTTGATCTTTCTCTTCTTTCTTCTTAGAAAACTGATTCTTCCTTTTTACTCATTCACTTTGTTCTGTATCATACTTCCATTGACAATGTTCATTCCAGAAGCAGAATTGCCTCTCTGGGTAATCTGCTACATTCCAGTCATGATGTCCTTTCTTAACATTCTGCCATCTCCAAAATCATTCCCCTTTTTGATTCCATACCTCTTGTTTGAGAACACAATGTCTGTTACAAAGTTCAACGCCATGGTTTCGGGGCTGTTCCAACTTGGAAGCTCTTACGAATGGGTTGTGACAAAGAAGACAGGAAGGTCATCTGAATCAGACTTCTTAGCCTTTGCCGAAAGAGAATCGAAATCTTCGAACGAAGAGAAGATTCTCAGGAGACATTCTGAGCCAGGCCTTGAAATGTGGAGTAAACTCAAGCAACAACAAGAGAAACAAATGGTTTCCCAGAAGAAGAGAAACATGGTGTATAGAAAAGAGCTTGCCCTTGCTTTTCTTCTGCTCATTGCAGCTGCTAGAAGCATGCTGTCTGCTCATGGAGTTCACTTCTACTTCTTGCTTTTCCAGGGATTATCATTCCTGGTTGTGGGGTTGGATTTGATTGGTGAGCAAATGAACTGA 2007 39.71 MAPNSVVVTIEKHNTFPLLEINGSDSLLLSEKHKAASPKQLTWVLFLKAHKAFFFFSWLALATKTVFALAKKRIAYADINEEDPKSKGKRLYRFLKAFLAISIAALVIEIFAHLKKWNLGLVKPWQFEVHGVLEWFYMLWMSFRVDYVAPLVILLSKFCIVLFLIQSLDRLVLCIGCFWIKYKKLKPMIQGEEYDCEDPSSFPMVLVQIPMCNEREVYAQSIAAACELDWPRNRVLIQVLDDSDDGNLQNLIREEVLSWNEKGVNIVYRHRLIRTGYKAGNLKSAMECDYVKDYEFVAILDADFQPNPDFLKQTVPHFKGNPELGLVQARWTFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRAKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPDIITSKISKWKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVMMSFLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKTGRSSESDFLAFAERESKSSNEEKILRRHSEPGLEMWSKLKQQQEKQMVSQKKRNMVYRKELALAFLLLIAAARSMLSAHGVHFYFLLFQGLSFLVVGLDLIGEQMN 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7679576 7682117 - evm.model.ptg000021l.797 HCH13g0797 557302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0797 668 FunFam probable xyloglucan glycosyltransferase 5 196 421 - -
HCH13g0797 668 Pfam Glycosyl transferase family group 2 297 505 IPR001173 -
HCH13g0797 668 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 195 422 IPR029044 -
HCH13g0797 668 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 126 667 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
HCH13g0797 668 SUPERFAMILY Nucleotide-diphospho-sugar transferases 205 504 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0291 HCH-Chr12:1647979 HCH13g0797 HCH-Chr13:7679576 1.80E-272 dispersed
HCH13g0797 HCH-Chr13:7679576 HCH4g0567 HCH-Chr4:3711248 8.10E-238 dispersed
HCH13g0797 HCH-Chr13:7679576 HCH12g0532 HCH-Chr12:3125612 3.30E-247 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0797 K20887 - csv:101208151 1159.82