Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH13g0821 | ATGAGTAAGGAAAAGAAAAAAAAGATTCATTTTAGTAAAGTCTATTCGTTTTTGTGTATTCGGCCTTTGTTTAAGGAGCATCATGAACAAGTTGGCAAAAGTGGTTACTCCAGAGTTGTGTATTGTAATGATCCTGATAAACCAGAAGCAACTCAGTTGAATTATAGGGGAAATTATGTGTCAACTACTAAGTATACAGCTGCTAATTTTATCCCAAAGTCTTTATTTGAGCAGTTCAGGAGGGTTGCAAATATTTACTTTTTGGTTGTAGCTTGTGTTTCTTTCAGTCCGTTGGCGCCTTTTACAGCTCCTAGTGTTCTTGCTCCATTATTGGTGGTTATTGGAGCTACCATGGCCAAGGAAGCTATTGAAGATTGGAGGCGAAGAAAACAGGATATAGAGGCAAATAATCGAAAGGTTAAAGTGTTGCTTAAAAATCACAAATTTGAAGAAACCAGATGGAAGAACCTCCGAGTTGGTGATGTTGTAAAGGTTTATAAGGATGATTATTTTCCTGCTGATCTGGTGCTGCTTTCATCTAGCTATGGAGATGGAATTTGCTATGTTGAGACCATGAATCTTGATGGGGAAACAAATTTAAAGTTGAAGCATTCCTCGGAAGTAACATCCCATCTTCGCAATGAAGACTCTTTCAAGAATTTTACAGCAGTAATCAAATGTGAGGACCCTAATGAACATCTGTATTCATTTGTTGGAACGCTGTATTACAATGGTGATCAGTACCCTCTGTCTCTACAGCATATTCTTTTGCGAGATTCTAAGCTTAAAAACACCAAATACGTTTATGGAGTTGTTATATTTACTGGCCATGATACAAAGGTGATGATGAATGCTACTGCTCCTCCTTCCAAAAGAAGTAAAATTGAGAAGAAAATGGATAGGATAATTTACGTCCTTTTCAGTACTCTAATTTTGATCTCTTTCATTGGATCTGTCACTTTTGGAGTGACAACTGAAAATGACATTGAGGATGGAAGGAACAGAAGATGGTATCTTCGCCCAGATGACACCACAGTTTTGTATGACCCCGAGCAAGCACCACTTGCTGCTTTTCTTCATTTCTTTACAGCTCTTATGTTGTATGGATACTTGATACCGATATCATTATATGTTTCCATTGAAATTGTGAAGGTTTTACAAAGTATTTTCATTAACCAAGACCAGGCAATGTATTATGAGGAAACAGATAAGCCAGCTCATGCCCGCACTTCTAATTTGAATGAGGAGCTTGGTCAGGTTTATATGATACTATCTGACAAAACGGGTACTTTGACATGTAACTCAATGGATTTTGTAAAATGTTCAGTAGCTGGAACTACTTATGGTCGCGGTGTGACCGAGGTGGAGAGGGCCCTGATGAGAAGAAGAGGAGACATTCTGCCTGAATTTGTTAACGAATCATCTGATATACCATACCATGATGGTAACAACACAGAGATTGGAAAGTCAATCGGAGGTTTCAATTTTAGAGATGAGCGCATCATGAATGGGCAATGGGTTAAAGAGCCTCATTCAGACATCATACAGAAATTTTTTCGAGTACTAGGAATCTGTCATACCGCAATTCCTGTCGTAAATAAAGAAACGGGTGAAATTTCCTTTGAAGCAGAATCACCTGATGAAGCAGCTTTTGTAATAGCTGCAAGGGAGACTGGCTTTGAGTTTTTTAGGAGGACACAGACAAGTATATCATTGCTCGAGTTAGATTACTTCAGTGGAAAAAAGGTTGAGCGAGTGTATAAGCTTCTTCATGTCTTGGAGTTCAGTAATTCTCGCAAACGAATGTCAGTAATTGTTAGGGATGCTGAGAATCAATTGTTGCTTCTCTCCAAGGGTGCGGATAGTGTGATGTTTGAAAAGCTGTCAAAAGATGGGCGGAAGTACGAATCTCGGACTAAGAAGCACATTAAGGAATATGCTGAAGCAGGCCTACGAACCTTGGTAATTGCATATCGTGAGCTTCGTGAAGAAGAATATAAAATATGGGAAGAAGAGTTTTTAAAGGCCAAAACTTCTGTCACTGCAGATCGAGATGCATTGATGGATGCAGCTGCTGATGATATTGAGATGAACTTGATTCTTCTTGGTGCCACAGCTGTTGAGGACAAATTGCAAACTGGGGTACCCGAGTGTATTGATAAGCTAGCTCACGCTGGAATCAAATTATGGGTATTAACTGGAGATAAGATGGAAACTGCTGTTAATATAGGGTATGCTTGCAGTTTACTGAGGAAAGGTATGGCCCTCTTTGAAATCACACTTGATTCACCTGAAATCGATGAACTGGAAAAACAAGGAGATAAGGGAGCTGTTGCCAAGGCATCTCTTGAAAGTGTGAGGAACCAAATCAAGAAAGGATTATCTCAGATTAGTAATGCCAAGGAAATTTCTCCAGCTGAAGAAAGTTCCCCTTCGTTTGGCTTGGTAATTGACGGCAAGTCCTTGGAATTTTCTCTCAACAAAAATATAGAGGCAATGTTTTTTGAGCTTGCTGTCAATTGCGATTCCGTTATATGCTGTCGTTCTTCACCCAAACAGAAAGCTCTTGTTACAAGGATGGTAAAGTTGAAAACTGGTAAAACAATACTATCTATTGGCGATGGGGCAAATGATGTTGGTATGCTTCACGAGGCCGATATTGGAGTTGGCATCAGTGGTGTCGAAGGGATGCAGGCAGTGATGGCTAGTGATTTCTCAATAGCTCAGTTTCGATTTTTGGAACGTTTGTTACTGGTGCATGGTCACTGGTGTTACAGGCGCATAGCAATGATGATATGCTACTTCTTCTACAAGAATATAGCTTTTGGATTAACTTTATTTTGGTTCGAGGCCTATGCTTCATTTTCTGGTCAGCCTGCCTATAATGATTGGTATATGTCATTTTACAATGTCTTCTTCACTTCACTTCCTGTGATTGCTCTTGGTGTTTTTGATCAAGATGTTTCGTCACGACTTTGCCTCAAGTATCCGTCTCTATATCTAGAGGGAGTAGATGATGTCCTCTTCAATTGGCTCAGAATACTTGGTTGGATGTTTAATGGAATTCTCAGCTCAATAGTCATCTACTTCTCTTCCGTCAACTCAATCAATAACCAGGCATTCCGTTCAGATGGACGAGTTGTTGACTACGATATTCTTGGCGTCACGATGTATACTTGTGTTGTTTGGACTGTAAACTGCCAGATGGCGCTTTCCGTTAACTACTTCACTTGGATTCAACATTTTTTCATCTGGGGAAGTATTGCATTATGGTACATGTTTTTGTTAGTCTATGGTTCTCTCTCGCCAACGATATCAACAACAGCATACAAGGTTTTGGTTGAAGCCTGCATCCCAAGTCCTCTCTATTGGTTGTTGACCTTACTGGTTGTCATGGGCAGTTTACTACCTTATTTCTGCTACAGAGGTTTTCAGACAAGATTCCTACCGATGTGCCACGATATCATACAAATAAATCGGTTGGAGGGATTGGAGGATTCTGGGACAGAGACTTCTGGTGAATTGCCTGTGCTAGTCCAGGACAGGCTACTACATTTGAAGGAGAGACTGTGGAAAAGAAATTTGAGAACTTGA | 3594 | 39.93 | MSKEKKKKIHFSKVYSFLCIRPLFKEHHEQVGKSGYSRVVYCNDPDKPEATQLNYRGNYVSTTKYTAANFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTAPSVLAPLLVVIGATMAKEAIEDWRRRKQDIEANNRKVKVLLKNHKFEETRWKNLRVGDVVKVYKDDYFPADLVLLSSSYGDGICYVETMNLDGETNLKLKHSSEVTSHLRNEDSFKNFTAVIKCEDPNEHLYSFVGTLYYNGDQYPLSLQHILLRDSKLKNTKYVYGVVIFTGHDTKVMMNATAPPSKRSKIEKKMDRIIYVLFSTLILISFIGSVTFGVTTENDIEDGRNRRWYLRPDDTTVLYDPEQAPLAAFLHFFTALMLYGYLIPISLYVSIEIVKVLQSIFINQDQAMYYEETDKPAHARTSNLNEELGQVYMILSDKTGTLTCNSMDFVKCSVAGTTYGRGVTEVERALMRRRGDILPEFVNESSDIPYHDGNNTEIGKSIGGFNFRDERIMNGQWVKEPHSDIIQKFFRVLGICHTAIPVVNKETGEISFEAESPDEAAFVIAARETGFEFFRRTQTSISLLELDYFSGKKVERVYKLLHVLEFSNSRKRMSVIVRDAENQLLLLSKGADSVMFEKLSKDGRKYESRTKKHIKEYAEAGLRTLVIAYRELREEEYKIWEEEFLKAKTSVTADRDALMDAAADDIEMNLILLGATAVEDKLQTGVPECIDKLAHAGIKLWVLTGDKMETAVNIGYACSLLRKGMALFEITLDSPEIDELEKQGDKGAVAKASLESVRNQIKKGLSQISNAKEISPAEESSPSFGLVIDGKSLEFSLNKNIEAMFFELAVNCDSVICCRSSPKQKALVTRMVKLKTGKTILSIGDGANDVGMLHEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGLTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSSRLCLKYPSLYLEGVDDVLFNWLRILGWMFNGILSSIVIYFSSVNSINNQAFRSDGRVVDYDILGVTMYTCVVWTVNCQMALSVNYFTWIQHFFIWGSIALWYMFLLVYGSLSPTISTTAYKVLVEACIPSPLYWLLTLLVVMGSLLPYFCYRGFQTRFLPMCHDIIQINRLEGLEDSGTETSGELPVLVQDRLLHLKERLWKRNLRT | 1197 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8064648 | 8072109 | - | evm.model.ptg000021l.821 | HCH13g0821 | 557326 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH13g0821 | 1197 | SUPERFAMILY | Calcium ATPase, transduction domain A | 142 | 283 | IPR008250 | - | |
HCH13g0821 | 1197 | Gene3D | - | 111 | 287 | - | - | |
HCH13g0821 | 1197 | Gene3D | - | 698 | 912 | IPR023214 | - | |
HCH13g0821 | 1197 | Gene3D | - | 532 | 678 | IPR023299 | GO:0000166(InterPro) | |
HCH13g0821 | 1197 | FunFam | Phospholipid-transporting ATPase | 544 | 702 | - | - | |
HCH13g0821 | 1197 | Pfam | E1-E2 ATPase | 137 | 326 | - | - | |
HCH13g0821 | 1197 | Pfam | Cation transport ATPase (P-type) | 525 | 629 | - | - | |
HCH13g0821 | 1197 | SFLD | Haloacid Dehalogenase | 406 | 923 | - | - | |
HCH13g0821 | 1197 | FunFam | Phospholipid-transporting ATPase | 116 | 286 | - | - | |
HCH13g0821 | 1197 | SUPERFAMILY | HAD-like | 420 | 927 | IPR036412 | - | |
HCH13g0821 | 1197 | Coils | Coil | 116 | 143 | - | - | |
HCH13g0821 | 1197 | NCBIfam | phospholipid-translocating P-type ATPase | 55 | 1157 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
HCH13g0821 | 1197 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 426 | 432 | IPR018303 | - | |
HCH13g0821 | 1197 | SFLD | p-type atpase | 406 | 923 | IPR044492 | - | |
HCH13g0821 | 1197 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 1030 | - | - | |
HCH13g0821 | 1197 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 26 | 1160 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
HCH13g0821 | 1197 | Pfam | Phospholipid-translocating ATPase N-terminal | 40 | 102 | IPR032631 | - | |
HCH13g0821 | 1197 | NCBIfam | HAD-IC family P-type ATPase | 106 | 219 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
HCH13g0821 | 1197 | NCBIfam | HAD-IC family P-type ATPase | 844 | 954 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
HCH13g0821 | 1197 | FunFam | Phospholipid-transporting ATPase | 702 | 912 | - | - | |
HCH13g0821 | 1197 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 49 | 1149 | IPR023298 | - | |
HCH13g0821 | 1197 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 431 | 664 | IPR023299 | GO:0000166(InterPro) | |
HCH13g0821 | 1197 | PRINTS | P-type cation-transporting ATPase superfamily signature | 424 | 438 | - | - | |
HCH13g0821 | 1197 | PRINTS | P-type cation-transporting ATPase superfamily signature | 872 | 891 | - | - | |
HCH13g0821 | 1197 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 900 | 1150 | IPR032630 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g1223 | HCH-Chr10:43417310 | HCH13g0821 | HCH-Chr13:8064648 | 0.00E+00 | dispersed | |
HCH13g0821 | HCH-Chr13:8064648 | HCH3g0149 | HCH-Chr3:953368 | 0.00E+00 | dispersed | |
HCH13g0821 | HCH-Chr13:8064648 | HCH1g0823 | HCH-Chr1:56880617 | 0.00E+00 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH13g0821 | K01530 | - | gmx:100817020 | 1819.67 |