Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0939 ATGGAAGTAGTAGAAGAACAATCCGGTTTTCCCTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTCGCCTCTGGAAATGTCGAGCGTGAAATTTTAGCCAAACAGGTTGCTTTGGATTTAACTGAGGATGATAAGCTTCAGCTTCATAATATGGTAGTTGATGCTGGCAGGGAAATCTTTTGTCCGATTGTTGGTTGTGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATGCACGACATACTGCGTCATGTTCAGTATGCCCAAGAGTCTACCCGACATCACGCCTACTTAGTCTGCATGTTTCTGAGGCACATGACTCTTTCTTTCAAGCAAAAGTTGCACGTGGCTATGCCGTGTATGAATGCCTGGTGGAAGGTTGTGGTTTAAAGTTCAAGACTTACAAAAGCAGACAGCAGCATCTAGTGGATAAGCATAGATTTTCCACTTCATATGAATTCTTGAAGAAAGCTCAACCATCTAAGAAACAGAGACAGAAAATACATAGGAAACAAGTATTTCAAGACAGGGAACAAGCTTCTGGTATGGAAGTAGAGAGTGAAACTATTGATGGCCTCATTTCAGGAGTATCTAAGCTAAGCACTTCAGACTCAACTCCTTCATCAATCAGCTTTGGCCGCCGTCATACACGAGGCTTAACTTTTGTACCCCGAACAGTCCAGCGTGAAAAAAAATCCGACTCTTCAACAGTTGGAACAAAGAGATAG 753 42.76 MEVVEEQSGFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDDKLQLHNMVVDAGREIFCPIVGCGAHLKSLDDFEDHYNARHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYAVYECLVEGCGLKFKTYKSRQQHLVDKHRFSTSYEFLKKAQPSKKQRQKIHRKQVFQDREQASGMEVESETIDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRTVQREKKSDSSTVGTKR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12564025 12565862 - evm.model.ptg000021l.939 HCH13g0939 557444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0939 250 MobiDBLite consensus disorder prediction 233 250 - -
HCH13g0939 250 PANTHER UNCHARACTERIZED 7 240 IPR039258 -
HCH13g0939 250 ProSitePatterns Zinc finger C2H2 type domain signature. 93 114 IPR013087 -
HCH13g0939 250 SMART c2h2final6 91 114 IPR013087 -
HCH13g0939 250 SMART c2h2final6 129 154 IPR013087 -
HCH13g0939 250 SMART c2h2final6 64 89 IPR013087 -
HCH13g0939 250 MobiDBLite consensus disorder prediction 206 250 - -
HCH13g0939 250 MobiDBLite consensus disorder prediction 206 223 - -
HCH13g0939 250 ProSitePatterns Zinc finger C2H2 type domain signature. 131 154 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32834 None None None None HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0939 - - - 0.0