Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH13g0939 | ATGGAAGTAGTAGAAGAACAATCCGGTTTTCCCTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTCGCCTCTGGAAATGTCGAGCGTGAAATTTTAGCCAAACAGGTTGCTTTGGATTTAACTGAGGATGATAAGCTTCAGCTTCATAATATGGTAGTTGATGCTGGCAGGGAAATCTTTTGTCCGATTGTTGGTTGTGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATGCACGACATACTGCGTCATGTTCAGTATGCCCAAGAGTCTACCCGACATCACGCCTACTTAGTCTGCATGTTTCTGAGGCACATGACTCTTTCTTTCAAGCAAAAGTTGCACGTGGCTATGCCGTGTATGAATGCCTGGTGGAAGGTTGTGGTTTAAAGTTCAAGACTTACAAAAGCAGACAGCAGCATCTAGTGGATAAGCATAGATTTTCCACTTCATATGAATTCTTGAAGAAAGCTCAACCATCTAAGAAACAGAGACAGAAAATACATAGGAAACAAGTATTTCAAGACAGGGAACAAGCTTCTGGTATGGAAGTAGAGAGTGAAACTATTGATGGCCTCATTTCAGGAGTATCTAAGCTAAGCACTTCAGACTCAACTCCTTCATCAATCAGCTTTGGCCGCCGTCATACACGAGGCTTAACTTTTGTACCCCGAACAGTCCAGCGTGAAAAAAAATCCGACTCTTCAACAGTTGGAACAAAGAGATAG | 753 | 42.76 | MEVVEEQSGFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDDKLQLHNMVVDAGREIFCPIVGCGAHLKSLDDFEDHYNARHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYAVYECLVEGCGLKFKTYKSRQQHLVDKHRFSTSYEFLKKAQPSKKQRQKIHRKQVFQDREQASGMEVESETIDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRTVQREKKSDSSTVGTKR | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 12564025 | 12565862 | - | evm.model.ptg000021l.939 | HCH13g0939 | 557444 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH13g0939 | 250 | MobiDBLite | consensus disorder prediction | 233 | 250 | - | - | |
HCH13g0939 | 250 | PANTHER | UNCHARACTERIZED | 7 | 240 | IPR039258 | - | |
HCH13g0939 | 250 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 93 | 114 | IPR013087 | - | |
HCH13g0939 | 250 | SMART | c2h2final6 | 91 | 114 | IPR013087 | - | |
HCH13g0939 | 250 | SMART | c2h2final6 | 129 | 154 | IPR013087 | - | |
HCH13g0939 | 250 | SMART | c2h2final6 | 64 | 89 | IPR013087 | - | |
HCH13g0939 | 250 | MobiDBLite | consensus disorder prediction | 206 | 250 | - | - | |
HCH13g0939 | 250 | MobiDBLite | consensus disorder prediction | 206 | 223 | - | - | |
HCH13g0939 | 250 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 131 | 154 | IPR013087 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32834 | None | None | None | None | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH13g0939 | - | - | - | 0.0 |