Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g0941 ATGGAAAATATAAGGAGATGTTTGGTTCTGGTTCTAGTTTTGGTAACGATGGTGGGAAAGGGAGAAGGGCAATTAGTAGAAAACTTCTACTTCGCAACTTGTCCAAACGTGGAGGTAGTAGTAAAGCAAGAAGTTCAAAACAAGTTAATTCAGACATTCACGACCATCCCTGCAACTTTGCGACTGTTTTTCCATGATTGCTTTGTTGAGGGATGCGATGGCTCAGTAATGATAGCTTCGCCAAATGGTGACGCAGAAAAGGATTCTGAAGACAATCTTTCATTAGCAGGAGACGGATTTGATACTGTAATTAAAGCTAAATTGGCAGTGGAAAAAGTTTGTCCAGGCATTGTCTCTTGTGCTGATATTCTGGCTCTTGCAGCCAGGGATGTCGTCGTCTTGGCTGGAGGACCAAATTACAACGTAGAATTAGGGCGTCGAGATGGACTTATCTCTCAAGCCTCTCGAGTTGCAGGAAATCTTCCAGAACCATCATTCAATCTAAACCAACTCACTACCATGTTTGCAGCTCACAACCTTAGCCTTCTCGACGTAATCGCACTCTCCGGAGCTCATACTCTCGGCTTCTCCCACTGCAACCGTTTTGCCAATCGCCTCTACTCCTTCTCTCCTTCTTCTCCCGTCGATCCATCTCTCGATCCAAACTACGCCCAACAGTTAATGCAAGCATGTCCTCAAGTCGTCGATCCCAGTGTCGCCATTAACATGGATCCTGTAACCCCACAAACCTTTGATAATGTTTACTATCAAAATCTTGTTGCAGGAAAAGGCTTGTTCACTGCTGATCAAGTTCTCTTCACTGACCTTGAGTCTCAACCCACGGTGACTGACTTTGCCAACAATCCAACCGGTTTCAATGTCGCGTTTATTGCCGCAATGACAAAGCTCGGTCGGGTTGGTGTCAAGACTGGTATTGAAGGTGAAATAAGATTAGATTGTACTGCGTTTAATTCATGA 978 44.58 MENIRRCLVLVLVLVTMVGKGEGQLVENFYFATCPNVEVVVKQEVQNKLIQTFTTIPATLRLFFHDCFVEGCDGSVMIASPNGDAEKDSEDNLSLAGDGFDTVIKAKLAVEKVCPGIVSCADILALAARDVVVLAGGPNYNVELGRRDGLISQASRVAGNLPEPSFNLNQLTTMFAAHNLSLLDVIALSGAHTLGFSHCNRFANRLYSFSPSSPVDPSLDPNYAQQLMQACPQVVDPSVAINMDPVTPQTFDNVYYQNLVAGKGLFTADQVLFTDLESQPTVTDFANNPTGFNVAFIAAMTKLGRVGVKTGIEGEIRLDCTAFNS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12695733 12699120 + evm.model.ptg000021l.941 HCH13g0941 557446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g0941 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH13g0941 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
HCH13g0941 325 Gene3D - 28 324 - -
HCH13g0941 325 PANTHER - 9 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 Pfam Peroxidase 41 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH13g0941 325 Gene3D Peroxidase, domain 2 162 303 - -
HCH13g0941 325 FunFam Peroxidase 28 170 - -
HCH13g0941 325 FunFam Peroxidase 162 303 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0437 HCH-Chr12:2517565 HCH13g0941 HCH-Chr13:12695733 5.50E-65 dispersed
HCH13g0941 HCH-Chr13:12695733 HCH14g0352 HCH-Chr14:32436022 1.10E-112 dispersed
HCH13g0940 HCH-Chr13:12601632 HCH13g0941 HCH-Chr13:12695733 6.70E-129 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g0941 K00430 - vvi:100249751 481.1