Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH13g1125 ATGTCTGAAGAAGAAGAGAGCCCTAAAACTAACCAAAGGAATACCCGGTCCTTTTCGAAGGATTCTGGTGAAACAAAGAAGATAAGTAATTCATATCTTCCAACTTATAATGATCTTGTGTTTGGTGAAGATTGTATTAGTTTGGAAGATTTGTTATCTGGTTTTCCAGGACGGCATTCTCAAATTCGCAAGCTTTTACACCTTTTCGGTCCCTTGAATTCTCCCATTCTTCCACTTTTTGTTTATGGAGGAACTTCTTCTGGAAAAACTAGCGTTGTTTTACAGATATTCCGTCATCTTAACCGTCCTTTTGTTTATTCAAGTTGTCGTACTTGTTATAGTTTGCGGACCCTATTCGAGTCTATCTTGAATCAGTTATTGCTTCATCAAAAAGATGGAGATAATGGATATTTGAGTGTAAGGCGATGTGAAAAGCCATCTGATTTCGTTCATTTTCTTCGTGAAGCCTTAGTTAATGTTGTAAGAGCTTTCCAAGGGAACCCAACGAAGTTAGGCCCGAAAGGGTTGAGAGGACATGGCCATGGTAAAATGATTTACCTGATTTTTGATAATTTGGAGCTTGTTAGAGATTGGGATAAGAGTTCAAGCATATTGTCCTTTCTGTTTAATCTCCATGGAATTTTAAATATGAACGAGGTTGGATTCGTCTTCATCAGTAATTCGTCTCCAGATACATACTATTCAAATATGGGTTACTTAGAGCCCATTCCTGTTTATTTTTCTGAGTACACACAAGATGATCTTCGTCAGATTTTTATGAGGAATCAAAGTAACCAAAAGCTGTATTCTTCCTTTTTGGATGTTGTAATGGGGCCATTCTATAGAACTACTAGACGAGTGAATGAATTATCCATAGCCTTTTCATCATTATATAAAACATATTGTGAAGGTGATTTGAAAATTCTTCCAAATGAAGACCCGAAGAGAAAATTGTTCAGTCATTTACGGCCACATATTGCTCCTGCCTTGAATCAGATATTTAAAATTTCATCTCAGAAGTCTGGTGTGTCTGATATTTCTAAGGACTTGGAATTTCACATGTCTACTTCTGCAAAATATCTTCTTCTTTCAGCATTCCTTGCTTCAAGAAATCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCTCTGATAGTCGAAAAAGGAAGAAGAGGCCATCAGAAAAATCAATTGGGCGGAAAGAAATTGCAGAACAGGAATTGCTTATGAAAGGACCTGGAACTTTTCCATTGGAAAGGTTGCTTGCGATATTTCAGTGCATTACATCTGGGGCAGAAATCTCACTTGAAGATGAACAAGGAATTGGAATCCAAAATGAGGACGGTGAACTTATGTCTGATGTTCTCCTACAACTTTCCAGCCTCTGCAATGCAAATTTTGTGGTTAAAGGAGGAAGCTGCCCACTAGAAGGCTCAACTCGATATAGATCTACAGTGTCTGAAGATATGGCTTTAAAGGTAGCAAGGAGTCTTAAGTTTCATCTACCCAATTACATGTACAGAAGATAA 1536 37.76 MSEEEESPKTNQRNTRSFSKDSGETKKISNSYLPTYNDLVFGEDCISLEDLLSGFPGRHSQIRKLLHLFGPLNSPILPLFVYGGTSSGKTSVVLQIFRHLNRPFVYSSCRTCYSLRTLFESILNQLLLHQKDGDNGYLSVRRCEKPSDFVHFLREALVNVVRAFQGNPTKLGPKGLRGHGHGKMIYLIFDNLELVRDWDKSSSILSFLFNLHGILNMNEVGFVFISNSSPDTYYSNMGYLEPIPVYFSEYTQDDLRQIFMRNQSNQKLYSSFLDVVMGPFYRTTRRVNELSIAFSSLYKTYCEGDLKILPNEDPKRKLFSHLRPHIAPALNQIFKISSQKSGVSDISKDLEFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGSDSRKRKKRPSEKSIGRKEIAEQELLMKGPGTFPLERLLAIFQCITSGAEISLEDEQGIGIQNEDGELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSLKFHLPNYMYRR 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 37048678 37051116 + evm.model.ptg000021l.1125 HCH13g1125 557630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH13g1125 511 MobiDBLite consensus disorder prediction 385 400 - -
HCH13g1125 511 MobiDBLite consensus disorder prediction 379 400 - -
HCH13g1125 511 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 47 510 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
HCH13g1125 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 267 IPR027417 -
HCH13g1125 511 Gene3D - 55 235 IPR027417 -
HCH13g1125 511 FunFam Origin of replication complex subunit 5 55 236 - -
HCH13g1125 511 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 354 508 IPR047088 -
HCH13g1125 511 MobiDBLite consensus disorder prediction 1 25 - -
HCH13g1125 511 Pfam AAA ATPase domain 55 211 IPR041664 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH13g1125 K02607 - csv:101223023 785.023