Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0031 ATGATCTTAATAATTCCAACGTACGCAGTTCTTCTTCTTCGTTCTTCTACTTGTCGTGGTGGAAGTGGAACAAAACGAGTAATGGGAAATGCGATGGGTTTGATTATTTTGGTGTTTGGTTTTAGTTTCATTGTAAATGTAAATGGTTTAAGTATGACATATTACTTGATGAGTTGCCCATTTGTTGATCCCATTGTGAAGAATAGCGTGAATAGAGCTCTTCAAAACGATCCTACTCTCGCTGCTTCCTTAATCAGAATGCATTTCCATGACTGTTTCGTTGAGGGATGCGATGGATCAGTGCTGATTGATACAACAAGAGACAACACTGCTGAAAAAGATTCTCCTGCCAATCTCAGTTTGAGAGGTTTTGAACTCATTGATGACATTAAACAACAGCTTGAGAATCAATGCCCTGGTGTTGTTTCTTGTGCTGATATTGTTGCTATGGCTGCTAGAGATGCCGTCTTTTGGGCTGGAGGTCCATTTTATGACATACCAAAGGGAAGAAAGGATGGAACAAGGTCTAGAATTGAAGATACCATCAATTTGCCTTCTCCCTCCTTTAATGCATCTCAGCTCATTAATATGTTTGCCCAACGTGGTTTCACTCCTCAACAAATGGTCGCACTTTCTGGGGCTCATACGTTGGGAGTAGCAAGATGTGTAATGTTCAAAGGGAGACTAAACGGAGGAGATCCGATTCTGGATACGAACTTTGAGAAGACATTATCAAGAACATGCAGAAACGGAGACAATGCAGTGCAGCCATTCGACGCCTCATGGAATAGTTTTGATAATGTTTATTACAATGCATTGGTGAGAAATGCAGGAGTTCTTACTTCTGATCAGACACTCTACGCCAGCCCGAGAACAAGAGGAATTGTTAATGCTTACGCTATGAATGAAGCCTTGTTTTTCTTGGATTTTCAACAGGCAATCATCAAGATGGGTTTGCTTGATGTTAAACAAGGCTCCTATGGACAAGTACGACACAATTGCCGCAGGGTTAATTAA 1017 40.9 MILIIPTYAVLLLRSSTCRGGSGTKRVMGNAMGLIILVFGFSFIVNVNGLSMTYYLMSCPFVDPIVKNSVNRALQNDPTLAASLIRMHFHDCFVEGCDGSVLIDTTRDNTAEKDSPANLSLRGFELIDDIKQQLENQCPGVVSCADIVAMAARDAVFWAGGPFYDIPKGRKDGTRSRIEDTINLPSPSFNASQLINMFAQRGFTPQQMVALSGAHTLGVARCVMFKGRLNGGDPILDTNFEKTLSRTCRNGDNAVQPFDASWNSFDNVYYNALVRNAGVLTSDQTLYASPRTRGIVNAYAMNEALFFLDFQQAIIKMGLLDVKQGSYGQVRHNCRRVN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3070299 3072749 - evm.model.ptg000014l.1177 HCH14g0031 557934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0031 338 Pfam Peroxidase 66 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 ProSiteProfiles Plant heme peroxidase family profile. 49 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 CDD secretory_peroxidase 49 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH14g0031 338 SUPERFAMILY Heme-dependent peroxidases 49 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 Gene3D Peroxidase, domain 2 185 317 - -
HCH14g0031 338 FunFam Peroxidase 53 191 - -
HCH14g0031 338 PRINTS Haem peroxidase superfamily signature 142 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Haem peroxidase superfamily signature 160 172 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 FunFam Peroxidase 185 317 - -
HCH14g0031 338 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601(InterPro)
HCH14g0031 338 PANTHER PEROXIDASE 25-RELATED 45 334 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
HCH14g0031 338 Gene3D - 54 338 - -
HCH14g0031 338 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 141 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 122 135 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 160 175 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0031 338 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0031 HCH-Chr14:3070299 HCH14g0676 HCH-Chr14:35297952 9.50E-70 dispersed
HCH8g1358 HCH-Chr8:48399689 HCH14g0031 HCH-Chr14:3070299 1.50E-59 dispersed
HCH9g0176 HCH-Chr9:1044251 HCH14g0031 HCH-Chr14:3070299 1.30E-55 dispersed
HCH14g0031 HCH-Chr14:3070299 HCH4g0812 HCH-Chr4:5229906 4.30E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0031 K00430 - csv:101202852 514.227