Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0099 ATGACTGAGATCTCTGAGTTAGAGGAAGGGTTGGAGTTTGAGAAAAAGAGAGAGTTTGATTGGGTGCTGAATGCTCCTGATCATCCAGGTTTATTTAAGGAGTTTCTCAACTCTTTGAAGGAAACCATTTCATTTCATGGAAACAAGTTACTGGTTTTCAAGAATATTGCTTTCCATAAACAGTTGCTTCTAGTCCTACATGCTATTTTCCCTATCCTTCATTGTTTAAGAAACTACACACTCAAAACTTTCAAAAATGATCTAATTGCTGGTTTAACTATTGCAAGCATCTCCATTCCCCAGAGTATAGGATATGCAACATTGGCAAGGCTTGATCCTCAATATGGCCTTTATTCAAGTGTTGTTCCACCTATAATATATTCTCTACTGGGTTCTTCAAGTAAGATGGTAACTGGACCTGTGGCTGTGGATTCATTGCTTTTATTCTCATTTATTCATGGACTAGTAAATCCTGAAAGTGATCCAGTTGCATATAGAAATCTTGTATTGACTGCAACTTTCTTTGTTGGGATCTTTCAATCTTTGTTTGGCCTGTTTAGGTTAGGATTTCTTGTGGATTTTCTTTCCGAATCTGCAGCCACAGGGTTCACGGCAGGTGCGGCCATTATCATCGGTCTTCAACAACTGAAGGAACTATTTGGAATCACCAACTTCACTACCAAAACTGATGTCTTGTCTGTCATGATAGCTGTTTGGAGATCATTTCATCATAAATGGAGTCCTCTAACTTTCATCATTGGTTGTTCATTCCTCTTTTTCATCATTATCACTAGATTTCTGGGTAAAAAGAAAAAGAAACTATTCTGGCTTGCAGTCATATCTCCGCTACTATCTTTTATTTTGTCAACTCTGATTGTATATCTAACTAGAGCTGAAAGGAATGGTGTGAATATTGTGAAAGAGGTCAGAGGAGGCCTGAATCCAATCTCAGTGAAAGAATTGGAGCTTCATAGCACTCATTTTGGTCATATGGCTAAAGTTGGCCTGATCATTTCCATTATTAGCTTGATGGAAGCAATAGCGGTCGCCCGATCGTTCACATCCGGAAAAGGCAACCACCTTAATGCAAACAGGGAAATGTTAGCTTTAGGCTTCACTAATATTATAGGATCTTTCTTTTCTTGCTATGTAGTGACAGGTTCACTCTCAAGAACTGCAGTGAATATCAGTGCTGGATGTGAAACAGGAATGTCAAGTATTGTGATGGCCTTGACAGTGTCATTGACTCTGCAATTATGCACGAGGCTTATATATTCCACTCCGAAAGTAATTCTTGCATCGATAATTCTTTCCGCTGTTCCAGGACTCATCAACACGAAGGAAGCTTGCAATATATGGAAGGTCGATAAGCTCGATTTCCTTATCTGCTTAGGAGCCTTTTTTGGTGTGTTGTTTTATAATGTGCAGATTGGTCTCATAGTTGCGGTCGCAATATCGTTCGGTAAGATTGTTCTGATTTCAATTAGATCCGGCACAGATGTCCTTGGAAAACTCCCTGGAACTGATACTTATGGTGATGTTGAGCAATATCCTATGGGTGCTCAGATTCCTGAGGTTCTCATAATCCGTATTAAGTCTGCTTGGCTTTGCTTTGCAAATGCCAACTCTGTCAAAGACAGGATTATGAGAAGAGTCATTGAAGAAGAAGGTGGCAAGGAAAACGAAACCGAAAAAATACGAATGCTAATTCTCGATATGTCGAGTTTAATGGACATTGACACTGCTGGAGTTGCATCATTGAAGGAGTTGCATAAGAGACTGCTTTTTCATGAAATAGTTTTATCCATTGCCAACCCCAGATGGCAAGTTATTAGCAAGCTAAGATTAGCGAACTTTATCAGCACTATTGAAGGGAGAGCCTTCTTGACTGTTGAAGAAGCTGTAACTGCAAAATCTTGGAGATAA 1926 39.36 MTEISELEEGLEFEKKREFDWVLNAPDHPGLFKEFLNSLKETISFHGNKLLVFKNIAFHKQLLLVLHAIFPILHCLRNYTLKTFKNDLIAGLTIASISIPQSIGYATLARLDPQYGLYSSVVPPIIYSLLGSSSKMVTGPVAVDSLLLFSFIHGLVNPESDPVAYRNLVLTATFFVGIFQSLFGLFRLGFLVDFLSESAATGFTAGAAIIIGLQQLKELFGITNFTTKTDVLSVMIAVWRSFHHKWSPLTFIIGCSFLFFIIITRFLGKKKKKLFWLAVISPLLSFILSTLIVYLTRAERNGVNIVKEVRGGLNPISVKELELHSTHFGHMAKVGLIISIISLMEAIAVARSFTSGKGNHLNANREMLALGFTNIIGSFFSCYVVTGSLSRTAVNISAGCETGMSSIVMALTVSLTLQLCTRLIYSTPKVILASIILSAVPGLINTKEACNIWKVDKLDFLICLGAFFGVLFYNVQIGLIVAVAISFGKIVLISIRSGTDVLGKLPGTDTYGDVEQYPMGAQIPEVLIIRIKSAWLCFANANSVKDRIMRRVIEEEGGKENETEKIRMLILDMSSLMDIDTAGVASLKELHKRLLFHEIVLSIANPRWQVISKLRLANFISTIEGRAFLTVEEAVTAKSWR 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 18977335 18980599 - evm.model.ptg000014l.1109 HCH14g0099 558002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0099 641 Gene3D STAS domain 498 639 IPR036513 -
HCH14g0099 641 Pfam STAS domain 521 634 IPR002645 -
HCH14g0099 641 NCBIfam sulfate permease 71 627 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
HCH14g0099 641 Pfam Sulfate permease family 84 464 IPR011547 GO:0016020(InterPro)
HCH14g0099 641 PANTHER SULFATE TRANSPORTER 60 637 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
HCH14g0099 641 ProSiteProfiles STAS domain profile. 536 638 IPR002645 -
HCH14g0099 641 CDD STAS_SulP_like_sulfate_transporter 517 629 - -
HCH14g0099 641 SUPERFAMILY SpoIIaa-like 522 636 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g1260 HCH-Chr13:40494724 HCH14g0099 HCH-Chr14:18977335 3.60E-206 dispersed
HCH14g0099 HCH-Chr14:18977335 HCH4g1880 HCH-Chr4:50423243 1.80E-141 dispersed
HCH14g0099 HCH-Chr14:18977335 HCH13g0076 HCH-Chr13:443930 9.30E-191 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0099 K17469 - mdm:103420556 731.865