Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0122 ATGGCAACCATGAACTCCAGTGTTTTGGCCTGCAACTACGCCATTTCAGGAAGTGGGTCAGCTGAGCTTGGCTCAAAACTCAGTGCAGTGCCTTGTATTGCATCACCAGTCGGATCTGGTGGTTATAAGTTGCCTTGTATCAGAGCTCAGCATCAGCAAGCCACAGTTCCTGAAGCCAAAGATCAAGGAAGGAGGACTGCACTTGTTTACCTTGGAGCTACTCTCTTTGCAGCAGCTGCTGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGCAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAATTTGGAACATGCAAGTTCCCTGAGAACTTCACAGGCTGCCAAGATCTTGCTAAGCAAAAGAAAGTTCCATTTATCTCTGAGGATTTGGAATTGGAGTGTGAGGGAAAGGATAAGTACAAATGTGGTTCCAATGTCTTCTGGAAATGGTGA 525 45.52 MATMNSSVLACNYAISGSGSAELGSKLSAVPCIASPVGSGGYKLPCIRAQHQQATVPEAKDQGRRTALVYLGATLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLELECEGKDKYKCGSNVFWKW 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22307684 22308376 - evm.model.ptg000014l.1086 HCH14g0122 558025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0122 174 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 174 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER)
HCH14g0122 174 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 47 174 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)
HCH14g0122 174 Gene3D - 90 174 IPR044907 -
HCH14g0122 174 FunFam Photosystem I reaction center subunit N 90 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0122 K02701 - csv:101204396 293.123