Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0125 ATGCCGGCTTGGTGGGGGAAGAAATTCAGTAAAAACAAAGTCCAAAACCATCAGAGTAGTAGCTTTCATATCTTCCCCAAATCTTCTTCTTCCTCCCCTAAAAGTGAAATCAGTAACAAGGATCATAAACCTAAGAGCTTTGATGAACTCTCTGCTGTGATTTTCTCTCGTACTTCTCCGAGGTCTAGTAAGGATCTGGGTTCTTCCACTGGGTTTTCGGGTTTCGATTCCGATAGCGCGGAGAGGAGATGTAATCCTCAGCCTCTTCCTCAACCCAATTCAAACGTTATGATTGATCACGCTGTTGTAATTGGAACCGGGTTGGGTTCGGAGTCCAGTGTTAGCTCTTCTGGGTCATTTGATGATCATCCATCTGCAGCTCATGATCAATTCCAATTAGGTCCTTACAGAGGAGCTGGTGATACCAGAATAGAGACGAGGCCTAAGAGTCCGGGTATAGGATCGAGGGGACCGACCAGTCCTACATCACCTCTTAACCCAAGATTTTGCGCCATGAGTTTGGAGTCTCCAACGGGTAAGCTAGATGATGGAAGGTTTCAATGCCATAAGCTACCGCTTCCTCCAGGTTCTCCCGCTAGTTCTTCTTCCTTGACCAGCACAAGAGCTATTGGTGCCAGTGATAACAATGTTGGTACACAAGCCAAATGGAAGAAAGGAAGGCTTCTAGGAAGAGGGACATTTGGGCATGTTTACCTTGGTTTCAACAGCGTAAGCGGCCAAATGTGTGCAATTAAGGAGGTCAGAGTTATAACTGATGACTCATCTTCAAAAGAATGTCTCAAGCAATTGAATCAGGAGATTAGCGTGCTAAGCCAGCTTTCACATCCAAACATTGTCCGTTACTATGGTAGCGAAATGGGTGATGAAGCCCTCTCAGTCTATTTAGAGTTTATCTCTGGTGGCTCAATCCACAAATTACTTCAAGAATATGGCCCCTTCAAAGAACCTGTGATAAGAAACTATACACGAAAGATTCTTTCTGGACTTGCTTATCTGCATGGAAGGAATACAGTGCATAGGGATATCAAAGGTGCAAATATATTAGTGGATCCAAATGGCGAGGTCAAGTTAGTGGACTTCGGCATGGCAAAACTTATAACAAATTGTACTTCGATGCTTTCTTTCAAAGGAAGTCCTTATTGGATGGCACCCGAGGTTGTGATGAATACAAATGGCTACAGTCTCGCTGTAGATATTTGGAGCTTAGGGTGTACAGTTCTTGAAATGGCGACGTCTAAACCACCGTGGAGCAAGTATGAAGGGGTAGCTGCCATATTCAAAATTGGAAATAGCAAAGATATTCCTGAAATTCCGGACCATCTTTCCAGTGATGCTAAAAGTTTTGTGCAACTATGCTTACAACGGGATCCATCTGCACGTCCTACTGCTGCAGAACTGTTGGATCACCCTTTTATTCAAGATCAAGCAACTCCACGAGTTTCTGATGTCAATTTAGCCATAGATGTGTTTCCCTTTACCTTCGATGGAAGCCAGACCCCGCCAATGTTAGATCGCCATCCAAATAGAAAAAGTATAAGCATATGTGATGGAGATTATATGGCTAATCCAGCAATCACTTCAAGAGCTCTGAGGAGTCCAAGAGAAAATGTAAGATTGATCACATCCTTGCCTGTGTCTCCATGTTCGAGTCCATTACGAAAGTATGGCCCCGCACACCAGAGCTGCTACGTTTCGCCACCTCAAACATCTTACCTGATGATGGGTCATAGCGGTTATAATTTGAACGAATACTCAAATAACACGAGAGCCAACACATTGTACATTCCCGATCCATTACGTGAACCGGCACTATTGAAAGTGCAGACTCCTAGTGCATCACCAAGAAGAAGACCGATTTAA 1881 43.97 MPAWWGKKFSKNKVQNHQSSSFHIFPKSSSSSPKSEISNKDHKPKSFDELSAVIFSRTSPRSSKDLGSSTGFSGFDSDSAERRCNPQPLPQPNSNVMIDHAVVIGTGLGSESSVSSSGSFDDHPSAAHDQFQLGPYRGAGDTRIETRPKSPGIGSRGPTSPTSPLNPRFCAMSLESPTGKLDDGRFQCHKLPLPPGSPASSSSLTSTRAIGASDNNVGTQAKWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVRVITDDSSSKECLKQLNQEISVLSQLSHPNIVRYYGSEMGDEALSVYLEFISGGSIHKLLQEYGPFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGEVKLVDFGMAKLITNCTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDIPEIPDHLSSDAKSFVQLCLQRDPSARPTAAELLDHPFIQDQATPRVSDVNLAIDVFPFTFDGSQTPPMLDRHPNRKSISICDGDYMANPAITSRALRSPRENVRLITSLPVSPCSSPLRKYGPAHQSCYVSPPQTSYLMMGHSGYNLNEYSNNTRANTLYIPDPLREPALLKVQTPSASPRRRPI 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22616578 22621093 + evm.model.ptg000014l.1083 HCH14g0125 558028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0125 626 MobiDBLite consensus disorder prediction 109 123 - -
HCH14g0125 626 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 13 486 IPR050538 -
HCH14g0125 626 SMART serkin_6 223 479 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0125 626 FunFam Mitogen-activated protein kinase kinase kinase 221 503 - -
HCH14g0125 626 MobiDBLite consensus disorder prediction 58 76 - -
HCH14g0125 626 Pfam Protein kinase domain 224 479 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0125 626 SUPERFAMILY Protein kinase-like (PK-like) 222 565 IPR011009 -
HCH14g0125 626 ProSiteProfiles Protein kinase domain profile. 223 479 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0125 626 CDD STKc_MEKK1_plant 222 479 - -
HCH14g0125 626 Gene3D Transferase(Phosphotransferase) domain 1 219 495 - -
HCH14g0125 626 MobiDBLite consensus disorder prediction 109 166 - -
HCH14g0125 626 MobiDBLite consensus disorder prediction 58 95 - -
HCH14g0125 626 MobiDBLite consensus disorder prediction 1 45 - -
HCH14g0125 626 ProSitePatterns Protein kinases ATP-binding region signature. 229 252 IPR017441 GO:0005524(InterPro)
HCH14g0125 626 MobiDBLite consensus disorder prediction 11 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0845 HCH-Chr10:9437847 HCH14g0125 HCH-Chr14:22616578 1.10E-74 dispersed
HCH11g1235 HCH-Chr11:44550570 HCH14g0125 HCH-Chr14:22616578 4.70E-116 dispersed
HCH13g0088 HCH-Chr13:549176 HCH14g0125 HCH-Chr14:22616578 3.80E-60 dispersed
HCH14g0125 HCH-Chr14:22616578 HCH14g0260 HCH-Chr14:30500614 8.40E-88 dispersed
HCH14g0125 HCH-Chr14:22616578 HCH5g0821 HCH-Chr5:6454165 1.40E-122 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81215 PF00069 Pkinase 4.20E-72 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0125 K04421 - csv:101203907 896.345