Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0196 ATGATTCCAACCGTTATCTACCACATGCACAGGATTCATGATCGTTGTACTGAAATCTTAGAGAAAACTAATCGCGCTTTCTTGATCAAAGGTGTTTGGTTTGCTGATATTGACATGTTGGCTACAGCAGATCCTTCAAATATACACTATATAAAGAGCAAAAGCTTTGAAAGATATCCAAAAGGCCCTGATTTCAAGTACATATTTGATATTTTGGGAGATGGGATTTTTAATTCAGACTCAGATTTGTGGAAGAATCAAAGAAGAATTGCTCATTCTTTGGTTCATCACCCATGTTTTCTTCAATTCTTGGTGAAATCTGCAAAGAAAAAGATAGAGAAAGGGCTGGTTCCGGTGCTTGAGAATGTTTCCAAAAATGGGTTGGTGATAGATTTGCAAGACTTGTTTCAAAGATTTGCTTTTTATACTAGTATTTTAGTTACTGGCTTTGATCTTCAATGGTCTATCTATGGAATTCCCACAAATTCCATTCTCTAA 498 35.54 MIPTVIYHMHRIHDRCTEILEKTNRAFLIKGVWFADIDMLATADPSNIHYIKSKSFERYPKGPDFKYIFDILGDGIFNSDSDLWKNQRRIAHSLVHHPCFLQFLVKSAKKKIEKGLVPVLENVSKNGLVIDLQDLFQRFAFYTSILVTGFDLQWSIYGIPTNSIL 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28211221 28211718 + evm.model.ptg000014l.1012 HCH14g0196 558099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0196 165 Gene3D Cytochrome P450 3 155 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0196 165 PANTHER CYTOCHROME P450 6 146 - -
HCH14g0196 165 Pfam Cytochrome P450 11 144 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0196 165 SUPERFAMILY Cytochrome P450 10 148 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0196 HCH-Chr14:28211221 HCH14g0199 HCH-Chr14:28344619 1.10E-82 dispersed
HCH14g0195 HCH-Chr14:28158298 HCH14g0196 HCH-Chr14:28211221 1.50E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0196 - - - 0.0