Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH14g0201 | ATGGCGTCGATAGGATTTCCAGCAATCCTTCTTGCTTTCATACCATTCATTTCCATCATTTTCTTTCCATCTTTGAAATGGAACGTCAATGGCATTCCTTGGAACTGGCCAATTCTAGGAATGATTCCAACCGTTATCTACCACATGCACAGGATTCATGATCGTTGTACTGAAATCTTAGAGAAAACTGATTGCACTTTCTTTATCAGAGGTGTTTGGTTTGCTGATCTTGACATGTTAGGAACAGCAGATCCTTCAAATATACACTATATAATGAGCAAAAGCTTTGAAAGATATCCAAAAGGTCCTGATTTCAAATACATATTTGAGATTTTGGGAGATGGTATTTTCAATTCAGACTCAGATTTGTGGAAGAATCAAAGAAGAACTGCTCATTCTTTGGTTCATCACCCATGTTTTCTTCAATTCTTGGTGAAATCTACAGAGAAAAAGATAGAGAAAGGGTTGGTTCCTGTGCTTGAGAATGTTTCCAAAAATGGGTTGGTGATAGATTTGCAAGATTTGTTTCAAAGATTCTCTTTTGATACCACTTGTATTTTAGTTACTGGCTTTGATCTCAATAGTCTATCTGTGGAATTCCCACAAATTCCATTCTCTAAGGCTATGGATGATGCTGAGGAAGTGATTTTCCTTCGCCATTTCTTTCCTAGAATCTTATGGGAATTGCAAAAGAAACTACAATTTGGACAAGCCAAGAGATTCAAAGAAGCTTGGGAAGTTATAGATCAAACCATAGCAGAATTGATAGCCCTCAAAAGAGAGAGATTGCAACAAGAGCAAGAGGAAAATGAAGGCACTGATATGATAACATCGTATATAAGTAACAAATATGATGATTTTGAAGTTAATGATAAGTTCTTGAGAGACACAGTTCTTAATTTCATGATTGCTGGAAGAGACACACTCAGTTCAGCTCTCTCTTGGTTTTTCTTCTGTATTTCAAACAACCCAATAGTTGAATCAAAGATCAGAGAAGAGCTCAAGGCTGCAATCCTCCCAGCCAAAGAAGCACAAAAATGGAGGATTTTCTCCATTGAAGAGCTGAACAAGCTAGTTTATTTGCATGCAGCTCTTTGTGAAACACTTAGACTCTATCCTCCAGTCCCATTCCAGCACAAAGTCCCTCTGCAACATGATATCCTTCCAAGTGGTCACCATGTCAATCCCAAAACCAAGATTCTGTTTTCTTTATATGCATTGGGAAGAATGACTTCTGTTTGGGGAAATGATTGCATGGAATTCAAGCCAGAGAGATGGATTTCAGAGAGAGGAACAATCAAACATGTTCCATCTTACAAATTCTTGGCTTTTAATGCAGGGCCAAGGACCTGTTTGGGGAAAGAAGTGGCTTTTACTCAAATGAAAATGGTTGCAGCTTCTATAATTCATAATTATAACATTCAACAAACAAAGAATAAGGTTATTCCCAGTGCTTCTATTATTCTTCACATGAAGCATGGGTTCAAAGTCAGGGTTACAAACAGATGGTCTTGA | 1515 | 37.56 | MASIGFPAILLAFIPFISIIFFPSLKWNVNGIPWNWPILGMIPTVIYHMHRIHDRCTEILEKTDCTFFIRGVWFADLDMLGTADPSNIHYIMSKSFERYPKGPDFKYIFEILGDGIFNSDSDLWKNQRRTAHSLVHHPCFLQFLVKSTEKKIEKGLVPVLENVSKNGLVIDLQDLFQRFSFDTTCILVTGFDLNSLSVEFPQIPFSKAMDDAEEVIFLRHFFPRILWELQKKLQFGQAKRFKEAWEVIDQTIAELIALKRERLQQEQEENEGTDMITSYISNKYDDFEVNDKFLRDTVLNFMIAGRDTLSSALSWFFFCISNNPIVESKIREELKAAILPAKEAQKWRIFSIEELNKLVYLHAALCETLRLYPPVPFQHKVPLQHDILPSGHHVNPKTKILFSLYALGRMTSVWGNDCMEFKPERWISERGTIKHVPSYKFLAFNAGPRTCLGKEVAFTQMKMVAASIIHNYNIQQTKNKVIPSASIILHMKHGFKVRVTNRWS | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 28372122 | 28373636 | + | evm.model.ptg000014l.1007 | HCH14g0201 | 558104 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH14g0201 | 504 | PANTHER | CYTOCHROME P450 | 20 | 495 | - | - | |
| HCH14g0201 | 504 | Coils | Coil | 248 | 268 | - | - | |
| HCH14g0201 | 504 | Pfam | Cytochrome P450 | 33 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | Gene3D | Cytochrome P450 | 26 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0201 | 504 | CDD | CYP86A | 67 | 495 | - | - | |
| HCH14g0201 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH14g0201 | 504 | SUPERFAMILY | Cytochrome P450 | 31 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0195 | HCH-Chr14:28158298 | HCH14g0201 | HCH-Chr14:28372122 | 8.80E-245 | dispersed | |
| HCH14g0197 | HCH-Chr14:28211845 | HCH14g0201 | HCH-Chr14:28372122 | 5.60E-22 | dispersed | |
| HCH14g0201 | HCH-Chr14:28372122 | HCH4g1139 | HCH-Chr4:7470329 | 9.10E-101 | dispersed | |
| HCH14g0199 | HCH-Chr14:28344619 | HCH14g0201 | HCH-Chr14:28372122 | 8.70E-285 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH14g0201 | - | - | - | 0.0 |