Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0201 ATGGCGTCGATAGGATTTCCAGCAATCCTTCTTGCTTTCATACCATTCATTTCCATCATTTTCTTTCCATCTTTGAAATGGAACGTCAATGGCATTCCTTGGAACTGGCCAATTCTAGGAATGATTCCAACCGTTATCTACCACATGCACAGGATTCATGATCGTTGTACTGAAATCTTAGAGAAAACTGATTGCACTTTCTTTATCAGAGGTGTTTGGTTTGCTGATCTTGACATGTTAGGAACAGCAGATCCTTCAAATATACACTATATAATGAGCAAAAGCTTTGAAAGATATCCAAAAGGTCCTGATTTCAAATACATATTTGAGATTTTGGGAGATGGTATTTTCAATTCAGACTCAGATTTGTGGAAGAATCAAAGAAGAACTGCTCATTCTTTGGTTCATCACCCATGTTTTCTTCAATTCTTGGTGAAATCTACAGAGAAAAAGATAGAGAAAGGGTTGGTTCCTGTGCTTGAGAATGTTTCCAAAAATGGGTTGGTGATAGATTTGCAAGATTTGTTTCAAAGATTCTCTTTTGATACCACTTGTATTTTAGTTACTGGCTTTGATCTCAATAGTCTATCTGTGGAATTCCCACAAATTCCATTCTCTAAGGCTATGGATGATGCTGAGGAAGTGATTTTCCTTCGCCATTTCTTTCCTAGAATCTTATGGGAATTGCAAAAGAAACTACAATTTGGACAAGCCAAGAGATTCAAAGAAGCTTGGGAAGTTATAGATCAAACCATAGCAGAATTGATAGCCCTCAAAAGAGAGAGATTGCAACAAGAGCAAGAGGAAAATGAAGGCACTGATATGATAACATCGTATATAAGTAACAAATATGATGATTTTGAAGTTAATGATAAGTTCTTGAGAGACACAGTTCTTAATTTCATGATTGCTGGAAGAGACACACTCAGTTCAGCTCTCTCTTGGTTTTTCTTCTGTATTTCAAACAACCCAATAGTTGAATCAAAGATCAGAGAAGAGCTCAAGGCTGCAATCCTCCCAGCCAAAGAAGCACAAAAATGGAGGATTTTCTCCATTGAAGAGCTGAACAAGCTAGTTTATTTGCATGCAGCTCTTTGTGAAACACTTAGACTCTATCCTCCAGTCCCATTCCAGCACAAAGTCCCTCTGCAACATGATATCCTTCCAAGTGGTCACCATGTCAATCCCAAAACCAAGATTCTGTTTTCTTTATATGCATTGGGAAGAATGACTTCTGTTTGGGGAAATGATTGCATGGAATTCAAGCCAGAGAGATGGATTTCAGAGAGAGGAACAATCAAACATGTTCCATCTTACAAATTCTTGGCTTTTAATGCAGGGCCAAGGACCTGTTTGGGGAAAGAAGTGGCTTTTACTCAAATGAAAATGGTTGCAGCTTCTATAATTCATAATTATAACATTCAACAAACAAAGAATAAGGTTATTCCCAGTGCTTCTATTATTCTTCACATGAAGCATGGGTTCAAAGTCAGGGTTACAAACAGATGGTCTTGA 1515 37.56 MASIGFPAILLAFIPFISIIFFPSLKWNVNGIPWNWPILGMIPTVIYHMHRIHDRCTEILEKTDCTFFIRGVWFADLDMLGTADPSNIHYIMSKSFERYPKGPDFKYIFEILGDGIFNSDSDLWKNQRRTAHSLVHHPCFLQFLVKSTEKKIEKGLVPVLENVSKNGLVIDLQDLFQRFSFDTTCILVTGFDLNSLSVEFPQIPFSKAMDDAEEVIFLRHFFPRILWELQKKLQFGQAKRFKEAWEVIDQTIAELIALKRERLQQEQEENEGTDMITSYISNKYDDFEVNDKFLRDTVLNFMIAGRDTLSSALSWFFFCISNNPIVESKIREELKAAILPAKEAQKWRIFSIEELNKLVYLHAALCETLRLYPPVPFQHKVPLQHDILPSGHHVNPKTKILFSLYALGRMTSVWGNDCMEFKPERWISERGTIKHVPSYKFLAFNAGPRTCLGKEVAFTQMKMVAASIIHNYNIQQTKNKVIPSASIILHMKHGFKVRVTNRWS 504
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 28372122 28373636 + evm.model.ptg000014l.1007 HCH14g0201 558104
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0201 504 PANTHER CYTOCHROME P450 20 495 - -
HCH14g0201 504 Coils Coil 248 268 - -
HCH14g0201 504 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0201 504 CDD CYP86A 67 495 - -
HCH14g0201 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH14g0201 504 SUPERFAMILY Cytochrome P450 31 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0195 HCH-Chr14:28158298 HCH14g0201 HCH-Chr14:28372122 8.80E-245 dispersed
HCH14g0197 HCH-Chr14:28211845 HCH14g0201 HCH-Chr14:28372122 5.60E-22 dispersed
HCH14g0201 HCH-Chr14:28372122 HCH4g1139 HCH-Chr4:7470329 9.10E-101 dispersed
HCH14g0199 HCH-Chr14:28344619 HCH14g0201 HCH-Chr14:28372122 8.70E-285 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0201 - - - 0.0