Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0233 ATGAGTATGATTTTTCATCGGAGCTTTTTTATGGTTGTTATGATCGCAATTTTCTCGGCTATTTCAACGATCGCCGAGAATTTCAATTCTTGCCTGAACTTCTCGAGCTATCCGTTTGGATTATCCGATCTGAGCCCTATCAAATTGAATTGCAGCAAAAATGGCGAGATTCTAATCGGCGAATTTGAAATCCAGAATATTACTGAAAGAAATATCTTAATCAAACTTCCTCAAAAGTGTAATACCTCAATCCAATCCCTCTTCAACGAAAATTACTGGCCTACTAGCCGGAATAATCTCTACCTTTTCAACTGTATGGAACCCATTTCATGCCCGATTTTGCTCGCCAATTTCAGTCAGATGAGGCCCAAGGATTGCTTCTCTAATACCAATAATAATATCAGTTGCTTCTCCCAGACTATTAAGAATCATACATTTCTTCCTCCTTTGAATCAATGCCAGTCCCTTTCTTCTTCCGTACTTGTTGATTTTGATTCTGTTTCGGATTTTTCGACTGCTTCGCTTCAGTTTAGCGTCATTGAATTGGAGTGGTGGCTCTCTCGATCGGGTTCCGTACGATGCTCAGAAAATGCCCAATACGAGGATGTCACCGCCCCAGTTCCAGGCCGAGGCCATGGATTTCGTTGCCATTGTAATCAAGGGTTTGAAGGAGATGGTTACGACCGCGACGGCGCCAGTGGTTGCCGGAAAGTGCCTGCAACTGCAAGTGTAAGACCAAAGTGCAATCCTTCAAATTACATGTCAGGCCGATGTGGAAATAGATTTGTTGCTCTAGTTGCAGGTATCGTTGTTGGAGCTTCTCTAATGGCTGTCCTGACTCTCGTATGTTACTGCATTCGTCGCCGCTCAATGTGTCTAAAAGGCCAGATGAGCGCAAAGCGGCTTCTTTGTGAGGCTGCTGGAAATTCTAGTGTTACTTTATATCCCTACAGAGAAATAGAAAAGGCCACAAATGGCTTCTCTGAGAAACACAGGTTGGGAACTGGGGCCTTTGGTACAGTTTATGCAGGAAAGATCCATGAGAATGACTGGGTTGCAGTAAAAAAGATAAAATATAGAGACCACAATAGCATTGACCAAGTCATGAATGAGATAAAACTACTTTCTTCTGTGAGCCACCAAAATCTAGTCCGCCTGCTGGGTTGCTGCATAGAGGAAGGCCAGCAGATCCTTGTCTATGAGTATATGCCGAATGGAACTCTCTCTCAACATCTTCAGAGAGAGCGTGGAAATGGCCTTCCATGGACGACACGGCTCACCATTGCTGCTGAAACCGCTCGCGCAATAGCTTATCTTCATTCTGCTGTGCATCCACCAATATATCACAGAGACATCAAATCTAGCAACATCCTTCTAGATCATAGCTTCAAATCGAAAGTCGCAGATTTTGGTCTTTCTAGACTTGGTATGACAGAAATATCACACATCTCAACAGCCCCACAAGGTACCCCAGGCTATGTTGATCCACAATACCATCAAAATTTCTATCTTTCAGATAAAAGTGATGTTTACAGTTTTGGAGTAGTCTTAGTAGAGATAATCACTGCATTGAAAGTAGTTGATTTCACTCGTCCCCAATGTGATGTAAACTTAGCTGCACTTGCCGTTGATAGGATCGGGAGAGGTTGTCTAGATGAATTAATTGACCCTTTCCTTGATCCACATAGAGATGCCTGGACCCTTTACTCTGTTCACAAGGTGGCTGAACTTGCCTTCAGATGCCTTGCTTTTCACAGTGACATGAGGCCTTCGATGATGGAAGTGGCAGAGGAACTGGAAAGCATCAGACGCAGCGGGTGGTCATCATTGGACGAACATTTTTCTACAGCATCATCTATAGGATCGGCTTGCTCATCCCCACATAGCATGAGTGAGAGATCTATAGGCGGGATGACAATTAAGAAGGCCGGGCTGCTCGCAAGTCTGGGGAGTCAGAGATTGATAATCCCACCGGAGAACAATCGCCTTAAGGATTGCCTACCTCCAGTAGAGGAAGTTATGGATAGTTCCCCAGTTTCCATACAGGATCCTTGGTTAAGTGAACAAAGCTCACCTTCAACAAATAGCTTATTGGGTAATATGGTACAGTGA 2112 43.94 MSMIFHRSFFMVVMIAIFSAISTIAENFNSCLNFSSYPFGLSDLSPIKLNCSKNGEILIGEFEIQNITERNILIKLPQKCNTSIQSLFNENYWPTSRNNLYLFNCMEPISCPILLANFSQMRPKDCFSNTNNNISCFSQTIKNHTFLPPLNQCQSLSSSVLVDFDSVSDFSTASLQFSVIELEWWLSRSGSVRCSENAQYEDVTAPVPGRGHGFRCHCNQGFEGDGYDRDGASGCRKVPATASVRPKCNPSNYMSGRCGNRFVALVAGIVVGASLMAVLTLVCYCIRRRSMCLKGQMSAKRLLCEAAGNSSVTLYPYREIEKATNGFSEKHRLGTGAFGTVYAGKIHENDWVAVKKIKYRDHNSIDQVMNEIKLLSSVSHQNLVRLLGCCIEEGQQILVYEYMPNGTLSQHLQRERGNGLPWTTRLTIAAETARAIAYLHSAVHPPIYHRDIKSSNILLDHSFKSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITALKVVDFTRPQCDVNLAALAVDRIGRGCLDELIDPFLDPHRDAWTLYSVHKVAELAFRCLAFHSDMRPSMMEVAEELESIRRSGWSSLDEHFSTASSIGSACSSPHSMSERSIGGMTIKKAGLLASLGSQRLIIPPENNRLKDCLPPVEEVMDSSPVSIQDPWLSEQSSPSTNSLLGNMVQ 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 29483462 29487309 - evm.model.ptg000014l.975 HCH14g0233 558136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0233 703 SUPERFAMILY Protein kinase-like (PK-like) 308 600 IPR011009 -
HCH14g0233 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0233 703 FunFam Wall-associated receptor kinase-like 14 294 402 - -
HCH14g0233 703 Gene3D Transferase(Phosphotransferase) domain 1 403 619 - -
HCH14g0233 703 FunFam Wall-associated receptor kinase-like 20 403 612 - -
HCH14g0233 703 Gene3D Phosphorylase Kinase; domain 1 289 402 - -
HCH14g0233 703 SMART serkin_6 327 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0233 703 ProSiteProfiles Protein kinase domain profile. 327 602 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0233 703 Pfam Protein kinase domain 328 596 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0233 703 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524(InterPro)
HCH14g0233 703 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 27 689 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
HCH14g0233 703 MobiDBLite consensus disorder prediction 680 703 - -
HCH14g0233 703 MobiDBLite consensus disorder prediction 678 703 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0233 HCH-Chr14:29483462 HCH9g0381 HCH-Chr9:2423616 4.70E-79 dispersed
HCH14g0233 HCH-Chr14:29483462 HCH4g0685 HCH-Chr4:4455595 3.60E-172 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81221 PF07714 PK_Tyr_Ser-Thr 2.20E-44 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0233 - - - 0.0