Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0260 | ATGCGTTGGTTGCGTAATATCCCCTTTACTAATTCTCAAACAGCGAGATCTCCGACCAAGACCACTAACTCCGGCGGTGATTCTCCGACGAGAAGAGCCTCCACCGACGATCATAATTATCGTGGTGCATGGCGTTTTGGTACTTCTAAATATTCACGTCATAGGAAGCTTCGTAATCTAAGTGAACGTGAAGTTGTTGCTGCTGCTTCTTCTTCTTTGGCTAAATGGTCTAAATATTCTACGCCTCAACCTGTTCCTAATCCTGACCATGCTGTTCCTTTGCCACTTCCTGAATTACCCTCTATTTTTCAACGTCGTGAAAAGTTCTTGAATCATTCTAGACTTGGAGATGGAGACTGCTGCCCTCTTCCCTCTCCTAAGACTATTTCTAACCAAAGAAGCGTCGAAGAGCGCGATGGAGATGGAGATGGAGATGAAGATAGAGATACATGTCGAGATCGAGATCGACATACAGATAGAGATAGAGCTTCCCCTGCTTTTAAATTTGGTGCTGGAGCTTACTCAAATGATCATCCCATTAAAAGTGTATTTGATTCTGGGGAGAGGCACAAGAAAGAAGATCATGTTGAAATGAGGTCATCTTGGAGCGTGCAACAAGATCTGAATGGATATTCTGAAAGATCAAAAAGCAGTTTTAGGATTGATATTCCTAGTAGGAGTGCTCCTAGTAGTCCTTTTGCCAGTCCTATTATTAGTCCTCAAAGAAATAGTTCCGGCAATATTTCGAATTACTATTATTTGGTTCCTGTTGGAAATCAAGGCTGGTCTGCACCTGAGATTGCATCTAATTCGGTAGTGATGACCGGGTTTCCTCCTGTAATTTTCGAACGTTCTGCTCTTAGTACAGAGAGTTCTCCTATACATAGCCCGAGAGTTCGAAGTCCTCATCGAGATCCTAGAAGTCCTCATCGAGATCCTAGAAGTCCCCATCGAGATCCCAGAAGTCCCCATCGAGATCCCAGAAGTCCATCAAGACCTGCATCTCCATTGCACTCCAAGGCATCTCTTGAAACACATGCTGCACGTCGTGAAAATTCTGCTCCTATCAATGTACACCCCTTACCTCTTCCACCTGGAGCATCGATGCCTTCACCATCGGCCCCGATTACACAAGCTAACACTAAAACTGAGTCATTCACAAGGAAAAATCAATGGCAAAAAGGAAAGCTTATTGGTCGCGGCACATTCGGAAGCGTTTATGTTGCAAGCAACAGGGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAATTATTTTTTGATGATCCAAAGTCAGCTGAGAGCATAAAGCAGTTAGAACAGGAGATCAAAGTTCTGAGCCAGCTGAAGCATCCAAATATTGTCCAATATTATGGCAGTGATATTGTTGAAGATCGATTGTATATATACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGAACACTGCGGAACTATGACCGAATCTGTTGTTCGGAATTTTACTCGTCACATTCTCTCCGGGCTGGCTTATTTGCACAGCACAAAGACTATACACCGGGACATTAAAGGTGCTAATTTACTAGTAGACTCTTCCGGTGTTGTCAAGCTTGCTGACTTCGGAATGGCGAAACATCTTGCTGGACCAGTTGCTGATCTCTCTTTAAAGGGAAGTCCATATTGGATGGCTCCTGAGCTCTTGCTTTCTGTGATGCATAAAGATAACAACTCTGATCTTGCTCTAGCTGTTGATATATGGAGTCTTGGTTGCACTATTATAGAAATGTTCACCGGAAAGCCCCCGTGGAGCGAGTTTGAAGGGGCTGCAGCCATGTTTAAGGTTATGAGGGATACTCCACCAATACCTGAATCCTTATCATTTGAAGGCAAAGATTTTTTAAGATGCTGCTTTCAGAGAAATCCTGCAGAGAGGCTTTCTGCTGCCTTGCTGCTGGAACATCCTTTTGTGAAAAACTTGCAGCAGCTAGATGTTCCATCTTGCTCTCAGGCATTCAATGGAGTAAATTTGTTGGATAAATGCTATAGTCCAAGAGAGCATTATTCAAGTAAACCAGATCAGGTTCCTATACTTCCAAACTCACAAATTTCAAAGGGAAAGTTGACTATTGAGAGTGTGATTGGCCAACTATCTCATCATGAAACCTCTGACTTAACAGTAACTTCTCGCCATTCCCCTCGTTCCACCCTTGACGCTCTTCCGGTCTTATCTCCACCGCGCTCGGTTCAAAATGTGCATCATCATCAACAACATCCTCCTCATCATCTTAGTCCTTCTGCAAACATGCTCAGTGTTGTCAATCAGAGCAATAAGAAGAGCTATACATTGAGATAG | 2343 | 43.15 | MRWLRNIPFTNSQTARSPTKTTNSGGDSPTRRASTDDHNYRGAWRFGTSKYSRHRKLRNLSEREVVAAASSSLAKWSKYSTPQPVPNPDHAVPLPLPELPSIFQRREKFLNHSRLGDGDCCPLPSPKTISNQRSVEERDGDGDGDEDRDTCRDRDRHTDRDRASPAFKFGAGAYSNDHPIKSVFDSGERHKKEDHVEMRSSWSVQQDLNGYSERSKSSFRIDIPSRSAPSSPFASPIISPQRNSSGNISNYYYLVPVGNQGWSAPEIASNSVVMTGFPPVIFERSALSTESSPIHSPRVRSPHRDPRSPHRDPRSPHRDPRSPHRDPRSPSRPASPLHSKASLETHAARRENSAPINVHPLPLPPGASMPSPSAPITQANTKTESFTRKNQWQKGKLIGRGTFGSVYVASNRENGALCAMKEVELFFDDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSDIVEDRLYIYLEYVHPGSINKYVREHCGTMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLAGPVADLSLKGSPYWMAPELLLSVMHKDNNSDLALAVDIWSLGCTIIEMFTGKPPWSEFEGAAAMFKVMRDTPPIPESLSFEGKDFLRCCFQRNPAERLSAALLLEHPFVKNLQQLDVPSCSQAFNGVNLLDKCYSPREHYSSKPDQVPILPNSQISKGKLTIESVIGQLSHHETSDLTVTSRHSPRSTLDALPVLSPPRSVQNVHHHQQHPPHHLSPSANMLSVVNQSNKKSYTLR | 780 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 30500614 | 30504968 | + | evm.model.ptg000014l.948 | HCH14g0260 | 558163 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 114 | 242 | - | - | |
HCH14g0260 | 780 | ProSiteProfiles | Protein kinase domain profile. | 392 | 653 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0260 | 780 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 149 | 657 | IPR050538 | - | |
HCH14g0260 | 780 | Gene3D | Transferase(Phosphotransferase) domain 1 | 388 | 675 | - | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 718 | 780 | - | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 72 | 91 | - | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 182 | 200 | - | - | |
HCH14g0260 | 780 | SUPERFAMILY | Protein kinase-like (PK-like) | 374 | 696 | IPR011009 | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 372 | 389 | - | - | |
HCH14g0260 | 780 | Pfam | Protein kinase domain | 393 | 653 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 288 | 389 | - | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 201 | 242 | - | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 297 | 328 | - | - | |
HCH14g0260 | 780 | FunFam | Mitogen-activated protein kinase kinase kinase 5 | 389 | 690 | - | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
HCH14g0260 | 780 | ProSitePatterns | Protein kinases ATP-binding region signature. | 398 | 421 | IPR017441 | GO:0005524(InterPro) | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 132 | 164 | - | - | |
HCH14g0260 | 780 | SMART | serkin_6 | 392 | 653 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0260 | 780 | MobiDBLite | consensus disorder prediction | 757 | 780 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0125 | HCH-Chr14:22616578 | HCH14g0260 | HCH-Chr14:30500614 | 8.40E-88 | dispersed | |
HCH14g0260 | HCH-Chr14:30500614 | HCH5g0821 | HCH-Chr5:6454165 | 2.50E-97 | dispersed | |
HCH14g0260 | HCH-Chr14:30500614 | HCH4g0675 | HCH-Chr4:4388153 | 4.50E-147 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81222 | PF00069 | Pkinase | 2.20E-66 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0260 | - | - | - | 0.0 |