Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0262 ATGAAGCATAACTCCTTCAAACTTTTCCATTTGCTTTTAAGCTTCTTGTTTTTGAATCATCTTGTGTCTTCACAACTTGATTATAGGTTTTATGATGACTCTTGTCCCAACCTAACGAGGATTATCAGATATGGCGTCCGCTTGGCGCTTTCTAATGATTCTCGGATCGGTGCTTCTCTCCTGCGGCTTCATTTTCATGATTGTTTTGTCAATGGATGTGATGGATCAGTGTTACTTGATGACACTAATACATTCAAGGGGGAGAAAAATGCATTGCCTAATATAAACTCAGCGCGAGGCTTTGAGGTCATTGATAATATAAAGGCTGCTTTAGAGAGAGCCTGCCCATATACGGTCTCTTGCACTGATATATTAAGTCTAGCTGCAAGAGAGGCAGTATATCTTGCTGGAGGACCATTTTGGTATGTTCCGGTTGGTCGCCGAGACGGTACAACAGCTAATGAGACTGAAGCTAATGAGCTGCCATCACCGGTGGAGGGATTGGAGGATATCACTGCAAAATTCACTTCTAAAGGTCTTACTGTCAAGGATGTTGTTGTGCTTTCAGGTGCTCACACTTTCGGGTTTGCTCAGTGCATCATGTTCAAACATAGGCTCTTCAACTTCAATGGCTCAGGAAATTCCGACCCAGAACTCGACGTGTCACTCCGACAGAATCTAAAAGGAATTTGTCCGAACCGAGACGAGTCCGACACGAACTTAGCCCCATTGGATGCTTACACAACCAACAGGTTTGACAATGTGTATTACAGGAACTTGTTGAACAAGTCAGGACTTCTTGAGTCAGACCAAGCTCTCATGACAGACAATACAACTGCTGATTTAGTAGTGAGCTACAGCAGGTATCCCAACCTGTTTTATAGGGACTTTGCAACATCAATGGTGAAGTTGGCGAATATCGGGGTCCTCACTGGTCAAAATGGGCAGATTAGGAGGAATTGCAGGGTAGTGAATTAG 978 43.66 MKHNSFKLFHLLLSFLFLNHLVSSQLDYRFYDDSCPNLTRIIRYGVRLALSNDSRIGASLLRLHFHDCFVNGCDGSVLLDDTNTFKGEKNALPNINSARGFEVIDNIKAALERACPYTVSCTDILSLAAREAVYLAGGPFWYVPVGRRDGTTANETEANELPSPVEGLEDITAKFTSKGLTVKDVVVLSGAHTFGFAQCIMFKHRLFNFNGSGNSDPELDVSLRQNLKGICPNRDESDTNLAPLDAYTTNRFDNVYYRNLLNKSGLLESDQALMTDNTTADLVVSYSRYPNLFYRDFATSMVKLANIGVLTGQNGQIRRNCRVVN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 30532058 30534177 + evm.model.ptg000014l.946 HCH14g0262 558165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0262 325 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
HCH14g0262 325 FunFam Peroxidase 162 304 - -
HCH14g0262 325 Gene3D - 29 325 - -
HCH14g0262 325 Gene3D Peroxidase, domain 2 162 304 - -
HCH14g0262 325 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 FunFam Peroxidase 29 179 - -
HCH14g0262 325 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH14g0262 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
HCH14g0262 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 PANTHER PEROXIDASE 72-RELATED 17 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0262 325 Pfam Peroxidase 45 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0262 HCH-Chr14:30532058 HCH2g1421 HCH-Chr2:55919412 2.80E-87 dispersed
HCH2g0950 HCH-Chr2:52882651 HCH14g0262 HCH-Chr14:30532058 7.10E-68 transposed
HCH3g0483 HCH-Chr3:3111123 HCH14g0262 HCH-Chr14:30532058 1.70E-69 transposed
HCH10g0061 HCH-Chr10:491422 HCH14g0262 HCH-Chr14:30532058 1.70E-47 transposed
HCH14g0262 HCH-Chr14:30532058 HCH2g0395 HCH-Chr2:46876525 2.20E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0262 K00430 - csv:101218459 521.931