Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0267 ATGCCTTCAAAGACCAAGAAACACTCAAAAACGCCGTCTAAATTATCATCAAACTCAGACAACTCTCATTCTCCAGTGACACCTCCTCCTCATGCTGCTGCTGAAGATGATTTTCTTTCCTATCTTGAAGAAGCTTCAATTAAATATCCTTCTTTTATTGATACCTCTGCTTTCATTGGTCAAGTTACTAATTCTCAAGTCCAGTCTACTGGTTGTAAACTTTGGCTTTCTGAATCTTCAATGCTTTCCTCTAACTTCACCCAAGGGTCTATCGTCTCGGTGGCATTGGCTTCTAAGAGAGGGAATGTTTCAGATGGATTTCCTCTCTCCTCATTAGTTGATGAATATGGTAGACGATTTGGAGTTGATTGTGGATATTCATTAACTAATGAAGCAGGGAAGTACTTTGCTCTTGCGAGAATTTTTTCTTCTAGTAAGGAAGCAAAGAATGGAGTTCAATTATCAACAAGCCTTTCATATACATTAGGTTGCCCTACATTAGGCAGTGTTGTTTTTATCTTCCCTTTAAAACATCATTTTTGTGATGGTTTGTTAAATGAGAATGGAAAATTAAAGAGCACAAAAGTAGATTCTCTCGGGATAAACTATTGTAAGGAACTTTTCCTGGAGTTGATTTCTTCTACCAATATATTAATGAGAAATAGTGAGGTGTCTTCCTCCACTATTTGTTCAGAAAAGATTCGTGGTCGTGGTGAAAATGGTAATTTAGCATCTCCAAGAACTCCCTTTTATCAATCAAAGCTAAGTCCTCTTTCTACTAAGCTATCCGCTTCACCAAATTGTGATGACTCAGTATCAAGTTTAGCAAATGTAGATAGTTCATCTTCACACTCACTTATTATAGACGCATTAGGAGAAGATAGTGTTAGAAAACTAGTACAAACCATTGCTTCCCATGAATTAAATTCACGTTGTTTACTCCTTGGAAATCTTATTACTCTACCAGTGCTTTCGGATTTTTGTACTTTCTTGGTTAGGGGTGGGAAAGGATTGTTAGTAGATGGTGACTCTCATGATTCTCTGCATACTGGAAGTAGCAATCATTCTCAATCTTATGTGTCAGACGAATATGGGAATTGTGCTTTCACTATAGACCAGCTGACAAAAGTATTTATAAATGTTCAATCAACCAAGGTTTCGAAGACGACACAAAAGAGAGTTCTAGCAGATGTGAAACTTGAAAATCTAAACACTAGAGCTAAAGTAGAATGTGAAGTTTTGAAATTAGGTGGACTTTCTAAAGAATATTCAATTTTGAAGGACATTATAATTGGCTGTTCGTTAAAAGGCACCTTATCAAGTCTTGGTTTACGAACTACAAAGGGATTGCTTCTTCATGGCCCACCTGGAACAGGAAAAACTTCTTTGGCTCAATTATGTGCTCATGATGCTGGTGTCAACTTATCCTATTTGAACGGACCTGAAATTATAAGTCAATATCATGGGGAAAGTGAAAAGGCTTTGCATGAAGTTTTTGAGGCAGCAAGCCAAGTTGCACCTTCTGTGATATTCATCGATGAGTTAGATGCTATTGCACCTGCCAGGAAAGATGGTGGTGAAGAGCTGTCTCAAAGAATTGTTGCTACATTGCTTAATCTGATGGATGGGATCAGTCGAAGTGATGGGCCACTAATAATTGCTTCTACCAACAGGCCTGATAGCATTGAACCTGCACTAAGGCGGCCTGGGAGACTTGACAAGGAAATTGAAATAGGTGTGCCATCTCCCAATCAACGCTTGGATATTCTACTTACTATTCTTAGTGAAATGGAACATTCTCTTTCAGATTTGCAAGTTCAACATCTTGCCATGGTTACACATGGTTTTGTTGGCGCTGATTTGGCTTCCCTTTGCAATGAGGCGGCTTTAAATTGTATTAGGCGTTATCATGAGTCTAAAAAGTTTATAGAATGTTTAAGTTTTGGTAGATCAATTGTAGCGGGTGAAGGTTCTTCTGATGACACTATTGAAGAGCCTGTTTTTTTAAAAGACATTAGCCATATCTCAGGGGATTGCTCTAGTTCTGCAACTTCAGCAATCTTTGGATTTTCTGTTTCATCCGAGACTCTAACATCTGTGTCCTTGAATGAAGTGGTAGATGATAATGAAGAGATTTATAGCCCTGCCAAAATCAACGGTAGATTGAAGGTTGTTTTTGAAGATTTTGAGATGGCTAGAATGAAAGTGAGGCCTAGTGCCATGCGGGAGGTCATACTTGAAGTTCCCAAGGTAAAATGGGAAGATGTTGGTGGCCAAAGAGAGGTTAAGACTCAATTAATGGAAGCAGTGGAATGGCCTCAAAAATATCAGGATGCATTCAAGCGTATAGGGACTCGACCTCCGACAGGAGTCCTGATGTTTGGCCCTCCTGGTTGCAGCAAAACCCTCATGGCACGTGCTGTAGCTTCTGAAGCAGGACTAAATTTTCTTGCAGTCAAGGGTCCAGAACTTTTCAGTAAATGGGTTGGTGAATCTGAGAAGGCTGTTAGATCTCTATTTGCTAAGGCAAGAGCTAATGCTCCATCAATCATATTTTTTGATGAAATTGATGGTCTTGCTGTCATTCGTGGGAAGGAAAGTGATGAGGTTTCTGTTTCTGATAGAGTTATGAGTCAGCTTCTGGTTGAGTTGGATGGTTTACATCAAAGAGTTGGTATTACTGTCATTGCTGCTACCAATCGACCGGATAAGATTGATCCAGCCCTTCTAAGACCAGGACGTTTTGACCGGCTGATATATGTTGGGCCACCAAATGAATCTGATCGGGAAGAGATATTCCGCATCCATTTGCGCAGAATTCCTTACAGCCCAGATATCAGTATAATGAAGCTGGCTTCTCTTACTCAAGGCTATACCGGGGCAGACATATCATTAATCTGTAGAGAAGCAGCTTTAGCTGCTCTAGAGGAGAGCTTTGAGGCTTCAGAAATAAATATGCAACATTTAGAAACTGCAATTAGACATGTGAAGCCATCGGAAACTGAAGCTTATCAAGAGTTATCAGACAGGTTTCAAAGGCTTGTTCGTTCTACTTCCAGCTCACAAGGAGCTGAAGTTGGGTATCAACAATGTGCAAAAGAATCTAACCGGTTTTCTATTCACTAA 3126 39.64 MPSKTKKHSKTPSKLSSNSDNSHSPVTPPPHAAAEDDFLSYLEEASIKYPSFIDTSAFIGQVTNSQVQSTGCKLWLSESSMLSSNFTQGSIVSVALASKRGNVSDGFPLSSLVDEYGRRFGVDCGYSLTNEAGKYFALARIFSSSKEAKNGVQLSTSLSYTLGCPTLGSVVFIFPLKHHFCDGLLNENGKLKSTKVDSLGINYCKELFLELISSTNILMRNSEVSSSTICSEKIRGRGENGNLASPRTPFYQSKLSPLSTKLSASPNCDDSVSSLANVDSSSSHSLIIDALGEDSVRKLVQTIASHELNSRCLLLGNLITLPVLSDFCTFLVRGGKGLLVDGDSHDSLHTGSSNHSQSYVSDEYGNCAFTIDQLTKVFINVQSTKVSKTTQKRVLADVKLENLNTRAKVECEVLKLGGLSKEYSILKDIIIGCSLKGTLSSLGLRTTKGLLLHGPPGTGKTSLAQLCAHDAGVNLSYLNGPEIISQYHGESEKALHEVFEAASQVAPSVIFIDELDAIAPARKDGGEELSQRIVATLLNLMDGISRSDGPLIIASTNRPDSIEPALRRPGRLDKEIEIGVPSPNQRLDILLTILSEMEHSLSDLQVQHLAMVTHGFVGADLASLCNEAALNCIRRYHESKKFIECLSFGRSIVAGEGSSDDTIEEPVFLKDISHISGDCSSSATSAIFGFSVSSETLTSVSLNEVVDDNEEIYSPAKINGRLKVVFEDFEMARMKVRPSAMREVILEVPKVKWEDVGGQREVKTQLMEAVEWPQKYQDAFKRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVIRGKESDEVSVSDRVMSQLLVELDGLHQRVGITVIAATNRPDKIDPALLRPGRFDRLIYVGPPNESDREEIFRIHLRRIPYSPDISIMKLASLTQGYTGADISLICREAALAALEESFEASEINMQHLETAIRHVKPSETEAYQELSDRFQRLVRSTSSSQGAEVGYQQCAKESNRFSIH 1041
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 30652896 30680070 - evm.model.ptg000014l.941 HCH14g0267 558170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0267 1041 Gene3D - 924 994 - -
HCH14g0267 1041 Coils Coil 972 992 - -
HCH14g0267 1041 MobiDBLite consensus disorder prediction 12 26 - -
HCH14g0267 1041 Pfam AAA+ lid domain 945 990 IPR041569 -
HCH14g0267 1041 Pfam AAA+ lid domain 603 639 IPR041569 -
HCH14g0267 1041 Gene3D - 580 711 - -
HCH14g0267 1041 ProSitePatterns AAA-protein family signature. 893 911 IPR003960 GO:0005524(InterPro)|GO:0016887(InterPro)
HCH14g0267 1041 Gene3D - 391 579 IPR027417 -
HCH14g0267 1041 FunFam calmodulin-interacting protein 111 isoform X1 748 923 - -
HCH14g0267 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 749 1008 IPR027417 -
HCH14g0267 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 639 IPR027417 -
HCH14g0267 1041 MobiDBLite consensus disorder prediction 1 30 - -
HCH14g0267 1041 Gene3D - 748 1000 IPR027417 -
HCH14g0267 1041 SMART AAA_5 446 582 IPR003593 GO:0016887(InterPro)
HCH14g0267 1041 SMART AAA_5 787 925 IPR003593 GO:0016887(InterPro)
HCH14g0267 1041 PANTHER AAA-FAMILY ATPASE 72 1011 IPR050168 GO:0005737(PANTHER)|GO:0009507(PANTHER)|GO:0016887(PANTHER)
HCH14g0267 1041 FunFam spermatogenesis-associated protein 5-like protein 1 924 1008 - -
HCH14g0267 1041 Pfam ATPase family associated with various cellular activities (AAA) 450 579 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
HCH14g0267 1041 Pfam ATPase family associated with various cellular activities (AAA) 791 922 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
HCH14g0267 1041 FunFam Putative vesicular transport protein (CDC48) 400 579 - -
HCH14g0267 1041 CDD RecA-like_CDC48_r2-like 762 921 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0267 HCH-Chr14:30652896 HCH9g1291 HCH-Chr9:39800558 0.00E+00 dispersed
HCH14g0267 HCH-Chr14:30652896 HCH9g0568 HCH-Chr9:3732070 6.20E-120 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0267 - - - 0.0