Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0287 ATGGAGTGGATTCGAGGACATGAAATTGGACATGGGAGTTTCGCGAAGATCAATTTAGCCATACCCACAAAAAATCCCACTTCCAATTTTTCTCCATTAATGGCCGTCAAATCCTCTGAAGCTTCCTCCTCTGCCTCACTCAAAAACGAGAAGCAAATTTTAGATCTTTTGGGAAATTGCCCACAAATCATTCAGTGTTTCGGTGAAAATCAAACCTTTGAATACGGAAAAGAGTTTTACAATCTATTTCTCGAATATGCCAGCGGTGGCAGTTTATCCGACAAGATACAGAGCCACGGTGGTCGGTTGTCGGAATCCGAAATTCAACGGTACACAAAAACGATTCTCGAAGGGCTCAAGTATATTCACGGAAAAGGGTTTGTTCATTGCGATATAAAACCTAAGAACATTCTTGTTTTTGATAACGGCGATGCTAAAATTGCCGATTTTGGATTGTCGAAAAAAGCAGAAGAAGAAAAAAGGGAGAATTTTGAATTTGGGTTTGAAATTAGAGGGTCTCCTCTTTATATGTCGCCGGAATCGGTAAATTGTAATGAGTATGAATCGCCGTGTGATATTTGGGCGGTGGGTTGTGCGGTGGTGGAGATGGCAACGGGAAAACCGGCGTGGAATTGTCGACCGGAATCGAATGTTTATTCATTATTACTAAGAATTGGGAATGGAGAGGAATTGCCGGAAGTTCCTGGGATATTGTCGGAAGAAGGAAAAGATTTTGTAAGGAAATGTTTTGTGAAAGATCCGAGGAAGAGATGGACGGCTAAGATGCTTTTGAATCATCCTTTTGTAGCTTGTTCATTGAAGGGTGAGGATGAAGAAGTTTCGATTTCTCCAAGATGTCCTTTTGATTTTGAAGAATGGTCGTCGGTTTCTGTTCAATCACGGGAGGAACAAAGATTTGTTTTTGAATCTGAATCGAATTCTTGGTCGGATTTGGCGGTGACTGAACGGCTGCTTCAGCTGGTGGATGATGGAGGCTTTGATTGGTCTGTTTCTGACAGTTGGGTCACCGTCAGATGA 1038 42.0 MEWIRGHEIGHGSFAKINLAIPTKNPTSNFSPLMAVKSSEASSSASLKNEKQILDLLGNCPQIIQCFGENQTFEYGKEFYNLFLEYASGGSLSDKIQSHGGRLSESEIQRYTKTILEGLKYIHGKGFVHCDIKPKNILVFDNGDAKIADFGLSKKAEEEKRENFEFGFEIRGSPLYMSPESVNCNEYESPCDIWAVGCAVVEMATGKPAWNCRPESNVYSLLLRIGNGEELPEVPGILSEEGKDFVRKCFVKDPRKRWTAKMLLNHPFVACSLKGEDEEVSISPRCPFDFEEWSSVSVQSREEQRFVFESESNSWSDLAVTERLLQLVDDGGFDWSVSDSWVTVR 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31273408 31274445 + evm.model.ptg000014l.921 HCH14g0287 558190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0287 345 ProSitePatterns Protein kinases ATP-binding region signature. 9 37 IPR017441 GO:0005524(InterPro)
HCH14g0287 345 SMART serkin_6 3 269 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0287 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0287 345 Pfam Protein kinase domain 6 269 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0287 345 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 270 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
HCH14g0287 345 SUPERFAMILY Protein kinase-like (PK-like) 3 306 IPR011009 -
HCH14g0287 345 CDD STKc_MAPKKK 2 269 - -
HCH14g0287 345 Gene3D Transferase(Phosphotransferase) domain 1 2 329 - -
HCH14g0287 345 ProSiteProfiles Protein kinase domain profile. 3 269 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0287 HCH-Chr14:31273408 HCH6g0309 HCH-Chr6:4569118 1.90E-65 dispersed
HCH10g0422 HCH-Chr10:3370517 HCH14g0287 HCH-Chr14:31273408 6.10E-58 transposed
HCH14g0287 HCH-Chr14:31273408 HCH2g0055 HCH-Chr2:3897514 1.60E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81224 PF00069 Pkinase 2.00E-55 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0287 - - - 0.0