Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0287 | ATGGAGTGGATTCGAGGACATGAAATTGGACATGGGAGTTTCGCGAAGATCAATTTAGCCATACCCACAAAAAATCCCACTTCCAATTTTTCTCCATTAATGGCCGTCAAATCCTCTGAAGCTTCCTCCTCTGCCTCACTCAAAAACGAGAAGCAAATTTTAGATCTTTTGGGAAATTGCCCACAAATCATTCAGTGTTTCGGTGAAAATCAAACCTTTGAATACGGAAAAGAGTTTTACAATCTATTTCTCGAATATGCCAGCGGTGGCAGTTTATCCGACAAGATACAGAGCCACGGTGGTCGGTTGTCGGAATCCGAAATTCAACGGTACACAAAAACGATTCTCGAAGGGCTCAAGTATATTCACGGAAAAGGGTTTGTTCATTGCGATATAAAACCTAAGAACATTCTTGTTTTTGATAACGGCGATGCTAAAATTGCCGATTTTGGATTGTCGAAAAAAGCAGAAGAAGAAAAAAGGGAGAATTTTGAATTTGGGTTTGAAATTAGAGGGTCTCCTCTTTATATGTCGCCGGAATCGGTAAATTGTAATGAGTATGAATCGCCGTGTGATATTTGGGCGGTGGGTTGTGCGGTGGTGGAGATGGCAACGGGAAAACCGGCGTGGAATTGTCGACCGGAATCGAATGTTTATTCATTATTACTAAGAATTGGGAATGGAGAGGAATTGCCGGAAGTTCCTGGGATATTGTCGGAAGAAGGAAAAGATTTTGTAAGGAAATGTTTTGTGAAAGATCCGAGGAAGAGATGGACGGCTAAGATGCTTTTGAATCATCCTTTTGTAGCTTGTTCATTGAAGGGTGAGGATGAAGAAGTTTCGATTTCTCCAAGATGTCCTTTTGATTTTGAAGAATGGTCGTCGGTTTCTGTTCAATCACGGGAGGAACAAAGATTTGTTTTTGAATCTGAATCGAATTCTTGGTCGGATTTGGCGGTGACTGAACGGCTGCTTCAGCTGGTGGATGATGGAGGCTTTGATTGGTCTGTTTCTGACAGTTGGGTCACCGTCAGATGA | 1038 | 42.0 | MEWIRGHEIGHGSFAKINLAIPTKNPTSNFSPLMAVKSSEASSSASLKNEKQILDLLGNCPQIIQCFGENQTFEYGKEFYNLFLEYASGGSLSDKIQSHGGRLSESEIQRYTKTILEGLKYIHGKGFVHCDIKPKNILVFDNGDAKIADFGLSKKAEEEKRENFEFGFEIRGSPLYMSPESVNCNEYESPCDIWAVGCAVVEMATGKPAWNCRPESNVYSLLLRIGNGEELPEVPGILSEEGKDFVRKCFVKDPRKRWTAKMLLNHPFVACSLKGEDEEVSISPRCPFDFEEWSSVSVQSREEQRFVFESESNSWSDLAVTERLLQLVDDGGFDWSVSDSWVTVR | 345 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 31273408 | 31274445 | + | evm.model.ptg000014l.921 | HCH14g0287 | 558190 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0287 | 345 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 37 | IPR017441 | GO:0005524(InterPro) | |
HCH14g0287 | 345 | SMART | serkin_6 | 3 | 269 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0287 | 345 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 127 | 139 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0287 | 345 | Pfam | Protein kinase domain | 6 | 269 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0287 | 345 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 2 | 270 | IPR052751 | GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
HCH14g0287 | 345 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 306 | IPR011009 | - | |
HCH14g0287 | 345 | CDD | STKc_MAPKKK | 2 | 269 | - | - | |
HCH14g0287 | 345 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 329 | - | - | |
HCH14g0287 | 345 | ProSiteProfiles | Protein kinase domain profile. | 3 | 269 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0287 | HCH-Chr14:31273408 | HCH6g0309 | HCH-Chr6:4569118 | 1.90E-65 | dispersed | |
HCH10g0422 | HCH-Chr10:3370517 | HCH14g0287 | HCH-Chr14:31273408 | 6.10E-58 | transposed | |
HCH14g0287 | HCH-Chr14:31273408 | HCH2g0055 | HCH-Chr2:3897514 | 1.60E-112 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81224 | PF00069 | Pkinase | 2.00E-55 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0287 | - | - | - | 0.0 |