Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0290 ATGACCGACCAACTCTCGAAACAAACCTCAATTTTCGGCTTACGTTTGTGGGTTATCCTCGGTGTCTGTGTTGGAGCGGCTTTCGTTCTTTTTCTCTTTCTTATTTCTCTCTGGATTGCTTCTAAACGCTCCAAAAGAAAGATTTCTCACAGACCCACAATTCCAATTGACTCCAAAGAGATCCAAGAAATCAGAATCGATCATTTTAACGCCGACCCAGTTCCAGAACCGGAACCCGTTTCAGGAATTGAGAGACAATCTCTGCTTTTGTTACCTCAAGAAGAAGAGAGAGTTAATAGGATTCATATTGACATCGGGAAAGATCATAGGATTTCATATCCAGAGCGTCTTGGTCGGTCTTCTTCTTCACATGGAAGTGGAGAAGGGAGATGTTGTGGAGATCATCAGTTACCAATGGCGGTTCCTGAAGTTTCTCATTTGGGTTGGGGCCATTGGTATACTTTGAGAGAGCTTGAAGCTGCCACTAATGGTTTTGCTCATGAGAATGTTATTGGTGAAGGTGGTTATGGGATTGTTTATCATGGTGTTTTGGAAGATGGAACTAATTTTGCTGTTAAGAATTTGCTTAACAACAGGGGACAAGCCGAGAAGGAGTTTAAAGTTGAAGTTGAAGCAATTGGAAGAGTGAGGCATAAGAATTTAGTTAGATTGCTTGGATATTGTGCTGAAGGTGCTCATAGGATGCTTGTGTATGAGTTCATAAACAATGGAAACTTGGAGCAATGGCTTCATGGGGATGTAGGATTTTCGAGTCCTCTTACGTGGGAGATTCGAATGAATATCATTCTCGGAACGGCTAAAGGGCTAGCTTACCTTCATGAGGGATTGGAACCTAAGGTTGTTCATCGGGATATCAAATCAAGTAACATCTTACTTGACAAGCAATGGAATGCCAAGGTTTCGGATTTTGGCCTTGCTAAGCTTCTCTGCTCTGAAAACAGCTATATTACAACCCGAGTCATGGGAACATTTGGCTATGTAGCACCAGAATATGCAAGTACGGGCATGCTAAATGAAAGAAGTGATGTATATAGTTTTGGGATACTTATTATGGAAATCATTGCGGGGAGGAACCCGGTTGATTATAGTCGTCCTCCCGAAGAGGTGAATCTGATTGATTGGCTTAAGAGAATGGTCAGTAATCGGAATCCTGAGGGAGTATTGGATCCAAAGCTCTCTGAAAAGCCTACTTCAAGAGCATTAAAGCGGGCTCTTCTTGTTGCTTTACGTTGTGTAGACCCAAATGCTCAGAAGAGGCCGAAAATGGGACATGTTATACATATGCTTGAAGCTGAAGATGCTCCATTTAAAGGGGATCGTAAAGTTGGAAGGGACTCAGAGCTGTCACGCTCAGATAATGTAAATGATGGCTTGAATGAGAAGCAGGAGATAGATTCAGGTGGCAGTAACGAATGA 1437 42.38 MTDQLSKQTSIFGLRLWVILGVCVGAAFVLFLFLISLWIASKRSKRKISHRPTIPIDSKEIQEIRIDHFNADPVPEPEPVSGIERQSLLLLPQEEERVNRIHIDIGKDHRISYPERLGRSSSSHGSGEGRCCGDHQLPMAVPEVSHLGWGHWYTLRELEAATNGFAHENVIGEGGYGIVYHGVLEDGTNFAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEFINNGNLEQWLHGDVGFSSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNAKVSDFGLAKLLCSENSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIIAGRNPVDYSRPPEEVNLIDWLKRMVSNRNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHVIHMLEAEDAPFKGDRKVGRDSELSRSDNVNDGLNEKQEIDSGGSNE 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31355245 31357703 - evm.model.ptg000014l.918 HCH14g0290 558193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0290 478 FunFam Putative receptor-like serine/threonine-protein kinase 241 451 - -
HCH14g0290 478 ProSiteProfiles Protein kinase domain profile. 165 444 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0290 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0290 478 MobiDBLite consensus disorder prediction 443 466 - -
HCH14g0290 478 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524(InterPro)
HCH14g0290 478 SMART serkin_6 165 444 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0290 478 Gene3D Transferase(Phosphotransferase) domain 1 241 449 - -
HCH14g0290 478 PANTHER OS01G0323000 PROTEIN 2 464 IPR052232 -
HCH14g0290 478 MobiDBLite consensus disorder prediction 443 478 - -
HCH14g0290 478 SUPERFAMILY Protein kinase-like (PK-like) 146 437 IPR011009 -
HCH14g0290 478 Pfam Protein kinase domain 167 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0290 478 CDD STKc_IRAK 171 437 - -
HCH14g0290 478 Gene3D Phosphorylase Kinase; domain 1 144 240 - -
HCH14g0290 478 FunFam Probable serine/threonine-protein kinase At1g01540 145 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0290 HCH-Chr14:31355245 HCH7g1646 HCH-Chr7:48561545 3.90E-170 dispersed
HCH14g0290 HCH-Chr14:31355245 HCH4g0629 HCH-Chr4:4123666 1.30E-202 wgd
HCH14g0290 HCH-Chr14:31355245 HCH6g0245 HCH-Chr6:3531102 2.50E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81225 PF00069 Pkinase 8.60E-47 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0290 - - - 0.0