Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH14g0292 | ATGGCTCTTCCTAATTCTCAGAAGGAAACCCAAGTGATTGGACATGGTGAAATTGGCCACAAGTCTATCTTACAAAGCGATGCACTTTATCAATATATACTTGAAACCAGTGTGTATCCAAGAGAGCATGAGGCTCTGAAAGAACTCCGGGAGTTAACAGCCAAACATCCACAGAACCTAATTGCAACAACTCCAGATGAAGGACAGCTTTTGAGCATGCTTGTGAAGCTGATGAATGCTAAGAACACAATGGAGATTGGTGTTTTCACTGGTTACTCTCTTCTTTCCACTGCCCTTTCTCTTCCTCATGATGGCAAGATATTGGCTCTAGATATCAAAAGGGAAGATTATGAACTAGGTCTACCTATAATTGAAAAGGCCGGTGTTGCTCACAAGATTGATTTCAGAGAAGGCCCTGCCCTTCCTCTTCTTGACGAAATGATCCAGCAAGGTACATACAATGAATCATTTGATTTTGTCTTTGTTGATGCCGACAAAAATAATTACCTAAATTACCACAACAGGCTCATTGACCTTGTGAAAATTGGGGGCGTAATTGGCTACGACAACACTCTGTGGGCTGGCTCTGTCGTGGCGCCGCCTGATGCCCCTCTTAAAAAGTATATTAGGGACTACAAAGACTTTATCTTAGACATGAACAAAGCCTTGGCTGTTGATCCAAGGGTCGAGATTTGCCAGCTTTCTGTTGGAGATGGGATTACTTTGTGTCGTCGTATCAGCTGA | 744 | 42.88 | MALPNSQKETQVIGHGEIGHKSILQSDALYQYILETSVYPREHEALKELRELTAKHPQNLIATTPDEGQLLSMLVKLMNAKNTMEIGVFTGYSLLSTALSLPHDGKILALDIKREDYELGLPIIEKAGVAHKIDFREGPALPLLDEMIQQGTYNESFDFVFVDADKNNYLNYHNRLIDLVKIGGVIGYDNTLWAGSVVAPPDAPLKKYIRDYKDFILDMNKALAVDPRVEICQLSVGDGITLCRRIS | 247 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 31421691 | 31423295 | + | evm.model.ptg000014l.916 | HCH14g0292 | 558195 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH14g0292 | 247 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 22 | 246 | IPR002935 | GO:0008171(InterPro) | |
| HCH14g0292 | 247 | Pfam | O-methyltransferase | 35 | 246 | IPR002935 | GO:0008171(InterPro) | |
| HCH14g0292 | 247 | PANTHER | O-METHYLTRANSFERASE-RELATED | 19 | 246 | IPR050362 | GO:0008757(PANTHER) | |
| HCH14g0292 | 247 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 26 | 245 | IPR029063 | - | |
| HCH14g0292 | 247 | Gene3D | Vaccinia Virus protein VP39 | 21 | 247 | IPR029063 | - | |
| HCH14g0292 | 247 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 15 | 247 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g0898 | HCH-Chr11:39949446 | HCH14g0292 | HCH-Chr14:31421691 | 3.30E-104 | dispersed | |
| HCH6g0595 | HCH-Chr6:35510266 | HCH14g0292 | HCH-Chr14:31421691 | 6.50E-38 | transposed | |
| HCH14g0292 | HCH-Chr14:31421691 | HCH7g0642 | HCH-Chr7:6385283 | 5.50E-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH14g0292 | K00588 | - | vvi:100243978 | 395.201 |