Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0304 | ATGGCCTTAGAAATCATGACGCAACAACGATTCACAAATAATAATAATTATTATAACACCTTCTCCTCCAAAATGGATTCCCACGCCGTTCAAGAAGCCGCCTCCGGCCTCGAAAGCGTCGAGAAACTCATCCTCTTACTATCCAACTCTCCACAAATCCCATCTCCCGATTCCCTCGACATCGATCGTGACTGCAAAGCCGTCGCCGACGCCGCCGTTTCCAAATTCAGAAAAGTCATCTCCCTCCTCAATCGTACCACACTCGGTCACGCTAGGTTTAGAAAAGCTCCCCTCCCTCTTCCTCTCTCCTCCGACACTTCTCACTCCTCTCAGGTTCTTTACGCCACGCCGATCCAGCAGATTCCGCCGCATCGGAATTACCACGGCGGAGGAGGTGAGGTTGAGAAGAAGGAATTGTTAAGCAGCAGTGTGAATTTCTCTTACTCTTCGGCTCGTAATTCGTTTGTGTCGTCGGTGACGGGTGACGGTGACGGTGACAGTAAGCAGATCACGTCGTCGTCGGCGGGTTTTCAGATTAGTAACATATCGCAGGTTTCGTCGGGTGGAAAACCTCCATTGAAGAGGAAGTGTAGCTCTGATAACGTGGGATCTGGGAAGTGTGGTTCAGCCGGGCGATGCCATTGTTCTAAGAAGAGAAAAACGAGGGTGAAGAGAGTGGTTAGGGTTCCGGCGATAAGTTTGAAAATGTCGGATATACCGCCGGACGATTATTCGTGGAGGAAATATGGTCAAAAGCCCATTAAAGGCTCTCCACATCCAAGGGGTTATTACAAGTGTAGCAGCGTGAGAGGTTGCCCAGCTCGGAAACACGTAGAGAGGGCCGTAGACGATCCAGCAATGCTAGTCGTCACATACGAAGGAGAACACAATCACAGTCTCCTTGTCGCAGAAACCAGCAATCTCATCTTAGAGTCCTCATAA | 942 | 49.79 | MALEIMTQQRFTNNNNYYNTFSSKMDSHAVQEAASGLESVEKLILLLSNSPQIPSPDSLDIDRDCKAVADAAVSKFRKVISLLNRTTLGHARFRKAPLPLPLSSDTSHSSQVLYATPIQQIPPHRNYHGGGGEVEKKELLSSSVNFSYSSARNSFVSSVTGDGDGDSKQITSSSAGFQISNISQVSSGGKPPLKRKCSSDNVGSGKCGSAGRCHCSKKRKTRVKRVVRVPAISLKMSDIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPAMLVVTYEGEHNHSLLVAETSNLILESS | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 31675357 | 31676939 | - | evm.model.ptg000014l.904 | HCH14g0304 | 558207 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0304 | 313 | FunFam | WRKY transcription factor 65 | 224 | 301 | - | - | |
HCH14g0304 | 313 | ProSiteProfiles | WRKY domain profile. | 235 | 301 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g0304 | 313 | MobiDBLite | consensus disorder prediction | 181 | 210 | - | - | |
HCH14g0304 | 313 | SUPERFAMILY | WRKY DNA-binding domain | 238 | 299 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g0304 | 313 | Pfam | WRKY DNA -binding domain | 242 | 298 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g0304 | 313 | SMART | WRKY_cls | 240 | 300 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g0304 | 313 | Gene3D | WRKY domain | 226 | 300 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g0304 | 313 | Pfam | Plant zinc cluster domain | 194 | 238 | IPR018872 | - | |
HCH14g0304 | 313 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 30 | 306 | IPR044810 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0304 | HCH-Chr14:31675357 | HCH8g1073 | HCH-Chr8:46622608 | 1.10E-51 | dispersed | |
HCH12g0297 | HCH-Chr12:1703611 | HCH14g0304 | HCH-Chr14:31675357 | 3.30E-59 | transposed | |
HCH5g1320 | HCH-Chr5:50115127 | HCH14g0304 | HCH-Chr14:31675357 | 3.80E-52 | transposed | |
HCH12g0602 | HCH-Chr12:3532882 | HCH14g0304 | HCH-Chr14:31675357 | 4.80E-72 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32918 | PF03106 | WRKY | 3.70E-26 | CL0274 | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0304 | - | - | - | 0.0 |