Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0309 ATGGATAATGAAATTGAAACTTCTAATTCTTCAACACAATCTACAGTCGACCATTCAGCACCGGCTATCGATAGGCAAAATAGTAAAGGGGACAATTTAACATCTATTTTATCTACTTCCGGCATATCGTCTTGGGCTAAAAGTTTGAGAATTCCACAATCACTCGAAGTAGCTGGAAATGACTCCAAAGCAGGAAATGCTGGGATGTCAGCATTTGCTCGTCTCAGTAGCGGTTTTGGACTGCGGATACCATCAATGTCTCAAGTACCAAGTGATGGTGTTGCAGATGCAGATGCAGACACCAAATCATCAGCCCAATCTAGTGTTATTGAATCATTCACAAAAGGTTTAGTTGATACATCACGTGGTGCTGTAAAGGCAATGCAGGTCAAGGCGCGCCATATTGTCTCTCAAAACAAACGAAGATATCAGGAGGGAGACTTTGATCTGGATATGACATATATCACTGAGAATGTAATTGCTATGGGGTTTCCTGCTGGTGACATCAGCTCTGGTTTTTTCGGATTTCTTGAGGGGTTCTATAGAAATCACATGGAAGAAGTAATCAGATTTTTTGAAACCCATCATAAGGGAAAGTACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCGTTATTTGAGGGCAAGGTTGCACATTTCCCATTTGATGATCATAATTGTCCTCCTATCCATCTCATAAAATCATTTTGTCGAAGTGCATATTCATGGTTAAAGGAGGACATCGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGTTAATGATTTGCAGCCTCCTTTTATTCCTTAAGTTCTTCCAAACATCAGAGGAGACAATTGATTACTACAATAAAAAAAGATGTGTAGATGGGAAGGCTTTAGTTCTCCCTAGCCAAATTAGGTATGTCAAGTATTTTGAGCGCATCTTAGCAAATTTAAATGGTGAAACTCCAACAGGACGGAGGTGCATGCTAAGAGGTTTTCGGCTTCACAATTGCCCTTACTGGGTTAGGCCTTCCATTACAATATCTAATCATAGTGGAATTTTGTTCTCAACAAGAAAACATCCAAAGACAAAGGATTTAATGCCAGAAGATTTCTGGATGAGGGCACCCAAAAAAGGATTTGTGGTCTTTGCATTGCCAGGGGAACCTGGTTTGACAGAGTTGGCAGGGGACTTCAAGATCCATTTTCATGACCGCCATGGCGATTTCTACTGTTGGTTAAATACAACAATGACAGAAAACAAAACATTTTTAAACGACACAGATCTCGATGGTTTTGATAAGAGGAAACTTCCTACTCCTGGATTTCAGGTCGAAGTAGTGATGATAGACTATGATGGTACTTTGCCAGCACCATTGGCAACTGGTTCTGCTAGCAAGGTTGGTCGTAGCTCTGTTCGTGATACAGTGTCGAGTCATGATGCAGCGTCCCGCAAAAACAAAGTTCCCGAGAAAGAAGAAAATGACGACGACGTATTCTCAGATAGTGATGAAGAAAATGGTGACACAAAAAACGGTGAAGCTCGATCTATGACTGGAACGGAACCTCCAAAAGCTGTAGCTGAAGTTGCTTCTCAAAACATTGGGAATTTAGCACATGAAACTAGTCAGATGTCACTCAGGAATGAGAGAAACAAAGAGAGTAATTCTTCAAATCAACCAAACATTGGAGTCACAAAACCTGAGACCCCACAATCAGATTCAGCAAGGGCAAGCGATTTCAAGGCAATAGCTGCTGATGCATCGGTTTTCACATTCGGGGATGAAGAAGACTTCGATAGTGAATGA 1815 41.05 MDNEIETSNSSTQSTVDHSAPAIDRQNSKGDNLTSILSTSGISSWAKSLRIPQSLEVAGNDSKAGNAGMSAFARLSSGFGLRIPSMSQVPSDGVADADADTKSSAQSSVIESFTKGLVDTSRGAVKAMQVKARHIVSQNKRRYQEGDFDLDMTYITENVIAMGFPAGDISSGFFGFLEGFYRNHMEEVIRFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCRSAYSWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFQTSEETIDYYNKKRCVDGKALVLPSQIRYVKYFERILANLNGETPTGRRCMLRGFRLHNCPYWVRPSITISNHSGILFSTRKHPKTKDLMPEDFWMRAPKKGFVVFALPGEPGLTELAGDFKIHFHDRHGDFYCWLNTTMTENKTFLNDTDLDGFDKRKLPTPGFQVEVVMIDYDGTLPAPLATGSASKVGRSSVRDTVSSHDAASRKNKVPEKEENDDDVFSDSDEENGDTKNGEARSMTGTEPPKAVAEVASQNIGNLAHETSQMSLRNERNKESNSSNQPNIGVTKPETPQSDSARASDFKAIAADASVFTFGDEEDFDSE 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31751854 31755622 + evm.model.ptg000014l.899 HCH14g0309 558212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0309 604 ProSiteProfiles C2 tensin-type domain profile. 327 454 IPR014020 -
HCH14g0309 604 MobiDBLite consensus disorder prediction 463 581 - -
HCH14g0309 604 ProSitePatterns Tyrosine specific protein phosphatases active site. 257 267 IPR016130 GO:0016311(InterPro)
HCH14g0309 604 MobiDBLite consensus disorder prediction 481 497 - -
HCH14g0309 604 SMART PTEN_C2_2 325 453 IPR014020 -
HCH14g0309 604 Pfam PTEN2, C2 domain 327 455 - -
HCH14g0309 604 Gene3D Protein tyrosine phosphatase superfamily 126 323 IPR029021 -
HCH14g0309 604 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 128 570 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
HCH14g0309 604 MobiDBLite consensus disorder prediction 1 33 - -
HCH14g0309 604 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 220 275 - -
HCH14g0309 604 CDD PTP_PTEN 151 316 IPR045101 GO:0016791(InterPro)
HCH14g0309 604 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 126 323 - -
HCH14g0309 604 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 255 294 IPR000387 GO:0016311(InterPro)
HCH14g0309 604 ProSiteProfiles Phosphatase tensin-type domain profile. 141 320 IPR029023 -
HCH14g0309 604 MobiDBLite consensus disorder prediction 537 579 - -
HCH14g0309 604 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 149 317 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0309 HCH-Chr14:31751854 HCH9g0272 HCH-Chr9:1682633 6.30E-40 dispersed
HCH14g0309 HCH-Chr14:31751854 HCH7g0674 HCH-Chr7:7539355 1.40E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0309 K01110 - csv:101213277 917.916