Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0317 ATGGAAACTCTCTTTTACCCTATCGCCTTCTCCGAACCTTACTCTTTACTGAATCGCAGGATCAATACAGGTGTTAAATCGAAAATCGGACCAATTTCTCCTCCCTCTCTACGTTCTTCTTTAATTCGAATTAATCTCTTTCCTCTTCCTTCTAAGAATTTCTCGAATCTTCGATTCCGTTGCGTCGCCGCAACCTCCGATCACAATCACGGTCACAGTCATGATCACGGTCACCGCCATCAGCATCAGCACCAGCATTGTTGCGGTTGTGACGGTGCCGGTGGTGACGTGGAGCTGACTGGAGCTCAGAAAGCGTTTATTCGATTTGCAAAAGCCATTAAATGGACGGATTTGGCGAATTATCTGAGGGAGCATTTACAGTTATGTTGCTGTTCCGCAGCTTTGTTTCTAGCTGCAGCTGTTTGCCCTTATTTGGTGCCTAAACCTGCTGTGAAGCCTTTACAGAATGCTTTTATTGCTGTTGCTTTCCCTTTGGTCGCGGTCTCTGCTTCTCTTGATGCTATGACTGATATTAGTGGTGGGAAAGTAAACATCCATGTATTGATGGCGCTTGCAGCCTTTGCATCAATATTCATGGGGAATTCCTTAGAAGGAGGACTACTTCTTGTGATGTTTAATCTGGCTCATATTGCTGAAGAGTATTTCACAAGCCAATCGATGATTGATGTCAGGGAGTTGAAGGAAAATCATCCAGATTTTGCTCTAGTTCTGGATATGAATGATGATAACCTTCCTGATACTTCAGATTTGGAACATAGAAGGGTGCCAGTGCGCAATTTGGAAGTGGGCTCATATATCTTGGTCGGAGCTGGTGAGTCTGTCCCTGTAGATTGTGAGGTTTATCATGGATGTGCTACAATCACTGTTGAGCACTTGACTGGAGAAGTCAAACCATTGGACATAAAGGTTGGGGAAAGAGTTCCCGGTGGCGCAAGAAACTTGGATGGTAGGATAATAGTGAAGGCTATAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAATTGACAGAAGAAGCACAGCTTAATAAACCCAAGCTACAGCGGTGGCTTGATGAATTTGGTGAACGTTACAGCAAGGTGGTTGTAGTTTTGTCCGTGGCTATTGCTCTGATTGGACCATTATTGTTCAAGTGGCCATTTATTTCAACACCGGGTTGCAGAGGATCAGTTTATCGAGCACTTGGCCTCATGGTAGCCGCATCACCATGTGCACTGGCTGCAGCTCCATTGGTGTATGCTATTGCAATAAGTTCCTGTGCAAGAAAGGGGATATTGCTGAAAGGTGGACATGTGCTTGACGCTATGGCTTCTTGCCACACTATTGCATTTGATAAAACTGGGACACTGACTACAGGGGGGCTTGTTTTTAAAGCAATTGAACCAATTTATGGACATAAAATTAGAGGGAAAAAATCACATCTTGCTTCATGCTGCATACCCAGCTGTGAGAAAGAAGCTCTTGCAGTGGCAGCTGCCATGGAAAAGGGTACAACTCACCCAATTGGAAGAGCTGTAGTAGATCATAGTGTGGGGAAAGACCTTCCTTCTATTTATGTTGAAAGTTTTGAATATTTCCCCGGAAGAGGTCTCATTGCAACTCTGCATGGCATTAAGTCAGGACTCGGAGGATGCGAACTGCAGAAAGCATCCCTTGGTTCTGTGGACTTCATCACTTCCTTTTGTAAATCAGAAAATGAATCAAGAAAGATCAAGGAAGCTGTTAGAGCATCGTCATATGGAAGTGAATTTGTTCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTGATTCACTTTGAGGATCAACCTCGACCTGGAGTGTTAGAGGTCATAGCAGAACTACTAAATCAGGCAAAACTTCGTGTCATGATGTTAACTGGTGATCATGACTCGAGTGCGTTGAAAGTTGCAAATGCTGTGGGCATAAATGAAGTTTACTACAGTCTTAAGCCTGAGGACAAACTTGGCCATGTGAAGGAAATCTCAAGGGCGATGGGTGGTGGTCTGATCATGGTTGGTGAAGGTATAAATGACGCACCTGCACTTGCTGCTGCTACTGTCGGAATAGTTCTTGCCCATCGCGCAAGTGCTACTGCTACGGCCGTTGCAGATGTTCTGCTTCTTCAGGATAATATTTCAGTTGTACCATTCTGTATTGCGAAGTCTCGTCAGACAACTTCACTGGTTAAACAAAATGTGACCCTTGCCTTGTCATCTATCCTTCTATCCTCCCTTCCATCCGTTTTGGGGTTCCTTCCCTTGTGGCTGACGGTCCTCTTGCATGAGGGTGGTACGCTCCTCGTTTGCCTAAATTCCATTCGAGCCCTAAATCAGCCCACGTGGTCATGGAGGCAAGATTTGCAAAATTTGTTTCATGATATTAGATCTAGATTTCTCACAAAACCAGAAATCAGCAGCTCTAACATCCAAACTGCACATTTATAG 2472 44.34 METLFYPIAFSEPYSLLNRRINTGVKSKIGPISPPSLRSSLIRINLFPLPSKNFSNLRFRCVAATSDHNHGHSHDHGHRHQHQHQHCCGCDGAGGDVELTGAQKAFIRFAKAIKWTDLANYLREHLQLCCCSAALFLAAAVCPYLVPKPAVKPLQNAFIAVAFPLVAVSASLDAMTDISGGKVNIHVLMALAAFASIFMGNSLEGGLLLVMFNLAHIAEEYFTSQSMIDVRELKENHPDFALVLDMNDDNLPDTSDLEHRRVPVRNLEVGSYILVGAGESVPVDCEVYHGCATITVEHLTGEVKPLDIKVGERVPGGARNLDGRIIVKAIKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIALIGPLLFKWPFISTPGCRGSVYRALGLMVAASPCALAAAPLVYAIAISSCARKGILLKGGHVLDAMASCHTIAFDKTGTLTTGGLVFKAIEPIYGHKIRGKKSHLASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPSIYVESFEYFPGRGLIATLHGIKSGLGGCELQKASLGSVDFITSFCKSENESRKIKEAVRASSYGSEFVHAALSVDQKVTLIHFEDQPRPGVLEVIAELLNQAKLRVMMLTGDHDSSALKVANAVGINEVYYSLKPEDKLGHVKEISRAMGGGLIMVGEGINDAPALAAATVGIVLAHRASATATAVADVLLLQDNISVVPFCIAKSRQTTSLVKQNVTLALSSILLSSLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNQPTWSWRQDLQNLFHDIRSRFLTKPEISSSNIQTAHL 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31863260 31874220 - evm.model.ptg000014l.891 HCH14g0317 558220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0317 823 Pfam E1-E2 ATPase 258 431 - -
HCH14g0317 823 SUPERFAMILY Calcium ATPase, transmembrane domain M 187 762 IPR023298 -
HCH14g0317 823 Gene3D - 462 612 IPR023299 GO:0000166(InterPro)
HCH14g0317 823 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
HCH14g0317 823 PRINTS P-type cation-transporting ATPase superfamily signature 681 700 - -
HCH14g0317 823 PRINTS P-type cation-transporting ATPase superfamily signature 604 615 - -
HCH14g0317 823 PRINTS P-type cation-transporting ATPase superfamily signature 705 717 - -
HCH14g0317 823 PRINTS P-type cation-transporting ATPase superfamily signature 627 637 - -
HCH14g0317 823 SFLD p-type atpase 433 734 IPR044492 -
HCH14g0317 823 NCBIfam HAD-IC family P-type ATPase 583 761 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
HCH14g0317 823 NCBIfam HAD-IC family P-type ATPase 259 472 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
HCH14g0317 823 SUPERFAMILY Calcium ATPase, transduction domain A 259 344 IPR008250 -
HCH14g0317 823 SUPERFAMILY HAD-like 449 781 IPR036412 -
HCH14g0317 823 PRINTS H+-transporting ATPase (proton pump) signature 681 697 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
HCH14g0317 823 PRINTS H+-transporting ATPase (proton pump) signature 713 738 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
HCH14g0317 823 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 60 819 IPR051949 -
HCH14g0317 823 Pfam haloacid dehalogenase-like hydrolase 449 694 - -
HCH14g0317 823 Gene3D - 223 349 - -
HCH14g0317 823 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
HCH14g0317 823 SFLD Haloacid Dehalogenase 433 734 - -
HCH14g0317 823 NCBIfam heavy metal translocating P-type ATPase 185 783 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
HCH14g0317 823 Gene3D - 444 732 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0317 HCH-Chr14:31863260 HCH8g1049 HCH-Chr8:46443646 2.50E-47 dispersed
HCH14g0317 HCH-Chr14:31863260 HCH6g0275 HCH-Chr6:3859516 2.50E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0317 K01534 - csv:101221102 1269.22