Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH14g0325 | ATGGTTTCGATTATCACATATATAAAACCAGACATGGCTTCATCCTCATCCAAAACCAATTCTTCATCCATGGAACAACACCATTTTCTCTTTTCTTCCATTTCTCTTTTCTTTCTCTTTCTTTCTTTCATTCTTCTCCGCCGTTCCAAAAAAATTCACAGAAACTTACCACCAAGTCCACCTTCTCTTCCGGTCATCGGTCACCTCCACCATTTAAAATTCCCCATCCACCGAACCCTTCAAAAACTCTCCCTCAAATACGGTCCCATTATCTCTCTCCGCCTCGGCTCCCGCCTCGCCGTCGTCGTCTCCTCCGCGGAAGCCGTACAAGAATGTTTCACTAAAAACGACATCGTCTTGGCCAACCGACCGCGTTTGCTAACCAGCAAACATATCGGCTACAACTACACTACCATGGTCGTGTCTCCGTACGGCGACCATTGGCGTAACCTCCGCCGTATCGGAGCCATCGAGATATTTTCCACTTCACGTCTCAACAAGTTCGCCGGAATCCGGAGGGATGAAGTGGGGAGATTGCTGCGGAAACTCTCACGTGATTCGATGGATAAGTTCTCGAAAGTGCACGTGCAGTCGGTCATTTCGGAGCTGACGTTTAATATCTCGATGAGGATGGCGGCCGGGAAAAGGTACTTCGGCGATGATGTGACGAATGAGGAAGAAGCGAGGGAGTTTAGAGAGTTGATTAAAGAGATAGTTTCGATGGGAGGAATATCGAATCCTGGAGATTTTATTCCGATACTGAATTGGATTCCGAATGGTTATGAGAAGAAGATAATGAAGCTTGGGAAGAGGATGGATTCGTTCTTGCAGGGATTAGTTGATGAACATCGGAGGAAGAAGGAAGAAGGAAGGAATACGATGATTGATCATTTACTCTCTTTGCAAGAATCGGAGCCTGCCAACTATGGAGACCAAATAATCAAAGGATTCATACTGGTCTTACTATTAGCAGGAACCGACACATCAGCTGTCACAATTGAATGGGCTTTGTCTCATTTGCTTAATAATCTTGAAGTACTTAAGAAAGCTAGAGAAGAGCTAGATGTTCAAATTGGACAAGAACGACTCGTCAAAGAATCCGATGTGCCTAAATTAAGATACCTTCAAGGAATCATCTCTGAGACTCTTCGATTGACACCGGCGGCTCCAATGTTGGTACCCCATTTCACGTCCGATGATTGCACCATATGTGGATATGACGTCCCACGTGGCACAATAGTAATAATCAATGCATGGGCCCTACATAGAGAACCTGATCAATGGGAGAACCCCACTTGTTTTAAACCAGAGAGATATGAGAAGTCAGAAACTGAAGTACAAAAGTTGTTGCCATTTGGGGTTGGAAGGCGAGCTTGCCCAGGGTCTGGCATGGCACAACGAGTGATGGGGTTGACTCTAGCGTCACTTATCCAATGCTACGAGTGGCAAAAAATTGGTGAAGAAGAAATGGACATGAGCGAAGGAAGAGGTGTTATCATGCCTAAAGCTGTGTCACTAGAGGCCATGTGCAAAGCCCGTCCCATCATCAACAAACTTTTTGATTGA | 1566 | 45.4 | MVSIITYIKPDMASSSSKTNSSSMEQHHFLFSSISLFFLFLSFILLRRSKKIHRNLPPSPPSLPVIGHLHHLKFPIHRTLQKLSLKYGPIISLRLGSRLAVVVSSAEAVQECFTKNDIVLANRPRLLTSKHIGYNYTTMVVSPYGDHWRNLRRIGAIEIFSTSRLNKFAGIRRDEVGRLLRKLSRDSMDKFSKVHVQSVISELTFNISMRMAAGKRYFGDDVTNEEEAREFRELIKEIVSMGGISNPGDFIPILNWIPNGYEKKIMKLGKRMDSFLQGLVDEHRRKKEEGRNTMIDHLLSLQESEPANYGDQIIKGFILVLLLAGTDTSAVTIEWALSHLLNNLEVLKKAREELDVQIGQERLVKESDVPKLRYLQGIISETLRLTPAAPMLVPHFTSDDCTICGYDVPRGTIVIINAWALHREPDQWENPTCFKPERYEKSETEVQKLLPFGVGRRACPGSGMAQRVMGLTLASLIQCYEWQKIGEEEMDMSEGRGVIMPKAVSLEAMCKARPIINKLFD | 521 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 31972808 | 31977202 | - | evm.model.ptg000014l.883 | HCH14g0325 | 558228 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH14g0325 | 521 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | P450 superfamily signature | 324 | 341 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | P450 superfamily signature | 377 | 388 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | Coils | Coil | 337 | 357 | - | - | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 108 | 129 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 84 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 417 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 376 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 313 | 330 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PRINTS | E-class P450 group I signature | 333 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | CDD | CYP81 | 88 | 506 | - | - | |
| HCH14g0325 | 521 | SUPERFAMILY | Cytochrome P450 | 57 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | FunFam | Cytochrome P450 family protein | 47 | 516 | - | - | |
| HCH14g0325 | 521 | Pfam | Cytochrome P450 | 57 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | Gene3D | Cytochrome P450 | 43 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0325 | 521 | PANTHER | CYTOCHROME P450 82C3-RELATED | 37 | 513 | IPR050651 | - | |
| HCH14g0325 | 521 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH10g0135 | HCH-Chr10:1096268 | HCH14g0325 | HCH-Chr14:31972808 | 2.50E-167 | dispersed | |
| HCH12g0588 | HCH-Chr12:3455925 | HCH14g0325 | HCH-Chr14:31972808 | 2.10E-116 | dispersed | |
| HCH14g0322 | HCH-Chr14:31937862 | HCH14g0325 | HCH-Chr14:31972808 | 7.10E-231 | dispersed | |
| HCH14g0323 | HCH-Chr14:31951753 | HCH14g0325 | HCH-Chr14:31972808 | 6.80E-258 | dispersed | |
| HCH14g0325 | HCH-Chr14:31972808 | HCH14g0327 | HCH-Chr14:32019696 | 2.10E-233 | dispersed | |
| HCH14g0324 | HCH-Chr14:31967696 | HCH14g0325 | HCH-Chr14:31972808 | 1.90E-255 | tandem | |
| HCH14g0325 | HCH-Chr14:31972808 | HCH14g0326 | HCH-Chr14:32008103 | 3.20E-210 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH14g0325 | K13260 | - | csv:101211829 | 753.051 |