Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0326 ATGCATAGAGATCCCAACCAATGGGAGGGTCCTTTGCGTTTCAACCAGAAAGATGTGAAAAATAGAAGTCAAGGTGCACAAATTGTTTTCATTTGGGGTAGGAAGGAGAGCTTGTCTTGGTTTCAATATGGCACACGGTGTGATGGAACTAACTTTGGTGGATTGATTCAATGCTTTGAGTGGAAAAATGTTGCTTCCCTCTCTCTCATCTTCCTCGTTTTCACTTTCAAACTTCTCCGACGATCCAAAAGAATTCACAAAAACTTACCACCGAGTCCACCTTCTCTTCCGGTCATCGGTCACCTCCATCTTTTCAAACCCCCCATCCACCGAACTCTTCAAAAACTCTCCGCCAAATACGGTCCCATCATCTCTCTCCGCCTCGGCTCTCGACTCGCCGTCGTCATATCATCACCGGCGGCGGTGGAAGAATGCTTTACTAAAAACGACATCGTTCTCGCCAACCGACCGCGTTTACTAACCGGCAAACACATCGCCTACAACTACACTACCGTGGTCTTGTCTCCGTACGGCGACCATTGGCGTAACCTCCGCCGTATCGGAGCCATCGAGATATTTTCCACTTCGCGTCTCAACAAGTTCGCCGGAATCCGGAGGGATGAAGTGGAGCGGTTGCTACACAAACTTTCACGTGATTCGATTAATAAATTTTCGAAAGTGGAAATGCAATCCGCCATTTCGGAGCTGACGTTTAATATCTCGATGAGGATGGCGGCCGGAAAGAGGTACTTCGGCGATGATGTGACGAATGAGGAAGAAGCGAGGGATTTTAGAGAGTTGATTAAACAGTTAGTGATGATTGGAGGGATATCGAATCCGGGAGATTTCATTCCGATACTGAATTGGATTCCGAATGTTTATGAGAGGAGGATAGTGAAGCTTGGGAAGAAATTGGATTCATTCTTGCAGGGCTTGGTTGATGAACATCGGAGGAAGAAGGAAGAAGGAAGAAACACGATCATTGATCATTTACTCTCTTTGCAAGAATCTGAGCCTTCTTCTTATGGAGATCAATTTATCAAAGGATTTATACTGGTCTTACTGTTAGCAGGGACTGATACATCAGTTGTCACAATTGAATGGGCTCTGTCTCATTTGCTTAACAATCCTGAGGTACTAAAAAAAGCTAGGGAAGAGCTAGATGTTCAAATTGGACAAGAGCGACTTGTTGAAGAATCTGAAGTGCCTAAATTACGATATCTTCAGGGAATCATCTCTGAGACTCTTCGATTGACACCAGCAGCTCCAATGTTGGTACCTCATTTCACATCTAACGACTGCACCATTTGTGGATATGACATCCCATGTGGCTCGATAGTGGTGGGGTTGACTCTAGCGACGCTTATTCAATGCTACGAGTGGAAAAGGATAGGGAAAGAAGAAGTTGACATGAGTGAAGGAAAGGGTGTTACCATGCCCAAGGCTATGCCATTAGAGGCCATGTGCAAAGCTCGTCCCATCGTCAACAAACTTTTTGCTTAA 1503 45.24 MHRDPNQWEGPLRFNQKDVKNRSQGAQIVFIWGRKESLSWFQYGTRCDGTNFGGLIQCFEWKNVASLSLIFLVFTFKLLRRSKRIHKNLPPSPPSLPVIGHLHLFKPPIHRTLQKLSAKYGPIISLRLGSRLAVVISSPAAVEECFTKNDIVLANRPRLLTGKHIAYNYTTVVLSPYGDHWRNLRRIGAIEIFSTSRLNKFAGIRRDEVERLLHKLSRDSINKFSKVEMQSAISELTFNISMRMAAGKRYFGDDVTNEEEARDFRELIKQLVMIGGISNPGDFIPILNWIPNVYERRIVKLGKKLDSFLQGLVDEHRRKKEEGRNTIIDHLLSLQESEPSSYGDQFIKGFILVLLLAGTDTSVVTIEWALSHLLNNPEVLKKAREELDVQIGQERLVEESEVPKLRYLQGIISETLRLTPAAPMLVPHFTSNDCTICGYDIPCGSIVVGLTLATLIQCYEWKRIGKEEVDMSEGKGVTMPKAMPLEAMCKARPIVNKLFA 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32008103 32017475 - evm.model.ptg000014l.882 HCH14g0326 558229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0326 500 Gene3D Cytochrome P450 74 450 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 Pfam Cytochrome P450 90 454 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 PANTHER CYTOCHROME P450 82C3-RELATED 447 492 IPR050651 -
HCH14g0326 500 PRINTS E-class P450 group I signature 141 162 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 PRINTS E-class P450 group I signature 409 427 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 PRINTS E-class P450 group I signature 346 363 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 PRINTS E-class P450 group I signature 117 136 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 PRINTS E-class P450 group I signature 236 254 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 PRINTS E-class P450 group I signature 366 392 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 SUPERFAMILY Cytochrome P450 90 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 CDD CYP81 121 485 - -
HCH14g0326 500 FunFam Cytochrome P450 82C4 79 448 - -
HCH14g0326 500 PRINTS P450 superfamily signature 357 374 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0326 500 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0326 HCH-Chr14:32008103 HCH14g0328 HCH-Chr14:32025759 1.40E-173 dispersed
HCH14g0325 HCH-Chr14:31972808 HCH14g0326 HCH-Chr14:32008103 3.20E-210 tandem
HCH14g0326 HCH-Chr14:32008103 HCH14g0327 HCH-Chr14:32019696 2.20E-192 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0326 K13260 - csv:101215449 593.964