Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH14g0328 | ATGGAAAACTATCAGCTTCTCTACGCTTCTCTCTCTCTCATCTTCCTCCTTCTAGCTTTCAAGCTTCACCGCCGATCCAAAAGAATTCTCAAAAACTTACCACCAAGTCCACCTTCTCTTCCCGTCATCGGTCATCTCCATTATTTGAAATTCCCAACCCATCGAACTTTCCAAAATCTTTCTGCCAAATACGGCCCCGTTATCTCTCTCCGCCTCGGATCTCGCCTCGCAGTCATCGAATGCTTCACTAAAAACGACATCCTTCTCGCCAACCGCCCTTCCATGCTCGCCGGAAAACACATCAACTACAACGACACCACCATGTTTAGATCTTCGTACTGCGATCATTGGCGTAACCTCCGCCGTATCGGAGCCGTCGAGATATTTTCCACGTCAAGTCTCAACAAGTTCGCCCGAATCAGGAGGGAAGAAGTGAAGCGATTACTACGAAAACTTTCACGGGATTCTCTCCATAAATTCTCGAAAGTAGAAATGCAATCTGTCCTTTCAGAGATGACGTTGAATATCGTGATGAGAATGGTGGCCGGAAAGAGGTATTTCGGAGATGACGTGGCCGGCGGTGAAGAGGCAAGGAAATTCAGTAAACTGATTAAAGAGATAACGGAGATGGGAGGAGTATCAAACCCAAGAGATTTTGTTCCGATATTGAATTGGATTTCAAAAGGTTATGAAAGGAAGTTGATTGATATCGGAAAGAGGATGGATTCATTCTTGCAGGGATTGATTGATGAACATCGGAGGAAGAAGGAAGAAGGAAGGAACACGATCATTGATCATTTACTTTCTTTGCAAGAATCGGAGCCTTCGTCTTATGGAGACCAAATTATCAAAGGTTTTGTGCAGGTCATACTAGTGGGTGGAACGGATACATCATCTGTGACAGTTGAATGGGCCTTATCCCATTTGTTGAACAATCGTGAAGTGCTAAGGAAGGCTAGAGATGAACTCGACGCTCAGCTTGGACACGAACGACTTGTCAAAGAAACAGACGTGTCGAAATTAGAATATCTTCAAGGAATCATCTTCGAAACTCTTAGGTTGAATTCACCAGCTCCAATGTTGCCAGCCCATTACACATACGATAATTGTACAATAAATGGATACGATGTTCCATGTGACACAATTGTATTAGTCAATGCATGGTCTATACACAGAGATCCAAATCAATGGGAGGATCCCATGAGTTTTCGACCAGAAAGACATGTAAAGTCAACAAACAATGTGCATACATTATTACCATTTGGACTTGGACGGCGAGCTTGTCCTGGTTCCGGCATGGCAATTCGAATGATGGGGTTAACTTTGGCAGCCTTGATTCAGTGCTTTGAGTGGGAGAAAGTCGACGATGAAGAAGTGGACATGACTGAAGGAAAAGGTTCTGTCGCGCCCAAAGCTGTGCCACTGGAAGCCATGTGTAGAGCTCGTCCATTATCAACAAATTTGTTCACTAAAAAATATGAAATCGAGTAA | 1491 | 43.86 | MENYQLLYASLSLIFLLLAFKLHRRSKRILKNLPPSPPSLPVIGHLHYLKFPTHRTFQNLSAKYGPVISLRLGSRLAVIECFTKNDILLANRPSMLAGKHINYNDTTMFRSSYCDHWRNLRRIGAVEIFSTSSLNKFARIRREEVKRLLRKLSRDSLHKFSKVEMQSVLSEMTLNIVMRMVAGKRYFGDDVAGGEEARKFSKLIKEITEMGGVSNPRDFVPILNWISKGYERKLIDIGKRMDSFLQGLIDEHRRKKEEGRNTIIDHLLSLQESEPSSYGDQIIKGFVQVILVGGTDTSSVTVEWALSHLLNNREVLRKARDELDAQLGHERLVKETDVSKLEYLQGIIFETLRLNSPAPMLPAHYTYDNCTINGYDVPCDTIVLVNAWSIHRDPNQWEDPMSFRPERHVKSTNNVHTLLPFGLGRRACPGSGMAIRMMGLTLAALIQCFEWEKVDDEEVDMTEGKGSVAPKAVPLEAMCRARPLSTNLFTKKYEIE | 496 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 32025759 | 32033651 | - | evm.model.ptg000014l.880 | HCH14g0328 | 558231 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH14g0328 | 496 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 482 | IPR050651 | - | |
| HCH14g0328 | 496 | Pfam | Cytochrome P450 | 34 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 421 | 430 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH14g0328 | 496 | CDD | CYP81 | 65 | 475 | - | - | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 172 | 190 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 418 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 282 | 299 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 345 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 386 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 302 | 328 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | E-class P450 group I signature | 428 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | Gene3D | Cytochrome P450 | 18 | 479 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | SUPERFAMILY | Cytochrome P450 | 34 | 482 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | Coils | Coil | 135 | 155 | - | - | |
| HCH14g0328 | 496 | Coils | Coil | 306 | 326 | - | - | |
| HCH14g0328 | 496 | FunFam | Cytochrome P450 family protein | 24 | 485 | - | - | |
| HCH14g0328 | 496 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | P450 superfamily signature | 428 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | P450 superfamily signature | 293 | 310 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0328 | 496 | PRINTS | P450 superfamily signature | 419 | 428 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0326 | HCH-Chr14:32008103 | HCH14g0328 | HCH-Chr14:32025759 | 1.40E-173 | dispersed | |
| HCH14g0328 | HCH-Chr14:32025759 | HCH2g0007 | HCH-Chr2:356082 | 4.00E-149 | dispersed | |
| HCH14g0327 | HCH-Chr14:32019696 | HCH14g0328 | HCH-Chr14:32025759 | 1.10E-223 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH14g0328 | K13260 | - | csv:101215449 | 655.595 |