Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0340 ATGATAATGAGCATTTGTGCTAACACACGCCTGCCCATTAACGTAGTCCAGCTACCGGTACTCGTTAGTATTAGCATTTATGCGAGGATGAAGCAAAAAGGAGACTTAAATTCGAAATCTCTTGCAACCTTCTGGATATTATGCGTAGTTCTAGTTTTAGCTCCAATTGTCCGATCAGCCTCAGCCTCATCTCAATTTCTTGGAATTGCTCCTCAGGATGTGATTTATTACAAGTCATCGGGCATGATCAAATGTAGGGATGGATCCAACAATTTTTCTAAGGCTCAGCTCAATGATGACTACTGCGATTGCCCTGATGGCACCGATGAACCTGGTACATCTGCATGCCCAAGTGGAAAGTTCTATTGTCAAAATGCAGGGCATATTCCACTTTTCTTGTTTTCTTCAAGGGTGAATGACGGCATATGTGATTGTTGCGACGGAAGCGATGAATATGATGGCAAAGTGCAGTGCCCAAATACTTGTTGGGAAGCTGGGAAAGTGGCAAGAGATAAATTAAATAAAAAGATTGCAACATTTGAAGAAGGTGTTATAATTAGAAAACGAGAAATTGAACAGGCAAAAGTTGCAATGACCAAGGACGAGGTAGAGCTAGTGAAATTGAAAAATGAGGAGAAAATACTAAAAGGGCTTGTTGAACAACTTAAAGAGCGTAAAGAACAAATAGAGAAGGTAGAAGAGGAGCAACGGTTATGGAGAGAAAAGGAAGAAAAGAAACGTTTACCAAGAGAAAAAGATGAGAATGAAAAACCTGAAGTGGTAGAAAATGAAGCTAGAGAAAATTCTGACGAGGAAAATAAACAAGCAGAAGACATTGTTGACGACAAAATTGGGAATTTGGAGGATTATGCCACAAATCAGGCTAGTGTGGACGACGAAGTTGACTCATCATTTGAAGCTGAACTTCCTAATAAACCTGGAGCCGAAGCATCGTTGTTAAAAAATGTAGAACAGGATATAGCGGAAGATAAAGATGAACCACTGGCTAAATCTGAAACTGAAATCAGTGCTGGTGCTAAAGAATCGTCTGAAGAAGTCTTGAAAAGGGGCAATGATGAATCTAAGAGTTCCGAGGAATTATCAAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCGAAGAATAGTGATAGTATAAATGATAGTGAAGAAGAAAGCCATGATGAGACCTTAAAGGACACACATGACAATGACGGTTTTGTTTCAGAGACTGACGATGATAGTCACAAATATGATGATGACATAGATGATGATTTAGAAGATATCCCGGACGAAAATCATGATGATTCTACTTCGTCAGAGAGATATTATTCAGATACGGAATTAAACTCACCAGATGTGGAAGATGACAGTAACCCCTCTTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTGAAAGCTGTTAATATATTCCAGTCTCCGGTGAACCAATCAGATGCTGCTAACATACGCAAGGAATATGAGGAGTCGAGTGGCAAGTTATCAAAAATACAATCAAGAATCTCAAGTTTATCACAAAAGCTAAAGAATGACTTCGGTCCGGAGAAGGAGTTTTATTCATTCTATGACCAATGTTTCGAAAGCAAGCAGAACAAGTATGTTTACAAAGTCTGCCCTTACAAACAAGCTTCCCAGGTGGAGGGGCACTCAACCACTCGCTTGGGGCGCTGGGATAAATTTGAGGACTCGTATAGAGTCATGATGTTTTCGAGTGGGGATAATTGCTGGAATGGACCTGATAGAAGCTTGAAGGTCAAGCTAAGATGTGGACTTAAAAATGAAGTAACTGATGTAGATGAACCAAGCCGTTGCGAATATATGGCATTGTTATCGACCCCAGCTGCTTGTGTTGAGGAAAGACTTCAGGAACTGAAAAACAAGTTGGACATGCTGAATAAGCCAGGGAAGCATGATGAACTTTGA 1977 40.36 MIMSICANTRLPINVVQLPVLVSISIYARMKQKGDLNSKSLATFWILCVVLVLAPIVRSASASSQFLGIAPQDVIYYKSSGMIKCRDGSNNFSKAQLNDDYCDCPDGTDEPGTSACPSGKFYCQNAGHIPLFLFSSRVNDGICDCCDGSDEYDGKVQCPNTCWEAGKVARDKLNKKIATFEEGVIIRKREIEQAKVAMTKDEVELVKLKNEEKILKGLVEQLKERKEQIEKVEEEQRLWREKEEKKRLPREKDENEKPEVVENEARENSDEENKQAEDIVDDKIGNLEDYATNQASVDDEVDSSFEAELPNKPGAEASLLKNVEQDIAEDKDEPLAKSETEISAGAKESSEEVLKRGNDESKSSEELSREELGRLVASRWTGENTEEQSKNSDSINDSEEESHDETLKDTHDNDGFVSETDDDSHKYDDDIDDDLEDIPDENHDDSTSSERYYSDTELNSPDVEDDSNPSWLEKIQKTVRNVLKAVNIFQSPVNQSDAANIRKEYEESSGKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKQNKYVYKVCPYKQASQVEGHSTTRLGRWDKFEDSYRVMMFSSGDNCWNGPDRSLKVKLRCGLKNEVTDVDEPSRCEYMALLSTPAACVEERLQELKNKLDMLNKPGKHDEL 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32290185 32299402 - evm.model.ptg000014l.868 HCH14g0340 558243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0340 658 MobiDBLite consensus disorder prediction 390 424 - -
HCH14g0340 658 MobiDBLite consensus disorder prediction 425 441 - -
HCH14g0340 658 CDD LDLa 116 151 IPR002172 GO:0005515(InterPro)
HCH14g0340 658 Pfam Glucosidase II beta subunit-like protein 502 641 IPR036607 -
HCH14g0340 658 MobiDBLite consensus disorder prediction 242 469 - -
HCH14g0340 658 Pfam Glucosidase II beta subunit-like 53 214 IPR028146 -
HCH14g0340 658 Coils Coil 191 242 - -
HCH14g0340 658 SUPERFAMILY Mannose 6-phosphate receptor domain 545 634 IPR009011 -
HCH14g0340 658 MobiDBLite consensus disorder prediction 242 285 - -
HCH14g0340 658 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 49 643 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
HCH14g0340 658 Gene3D - 112 164 IPR036055 GO:0005515(InterPro)
HCH14g0340 658 Gene3D - 536 635 IPR009011 -
HCH14g0340 658 ProSiteProfiles MRH domain profile. 541 636 IPR044865 -
HCH14g0340 658 MobiDBLite consensus disorder prediction 323 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0340 HCH-Chr14:32290185 HCH7g0263 HCH-Chr7:1829722 2.70E-28 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0340 K08288 - csv:101221877 860.907