Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0343 ATGCTTCATCCATTCTGGGTTTTCCCGTTTCTTTTCTTCTTTGGCCCTTCTCTTGCCATAGAAGATATGAAAACTTACATAGTCCATATGGCCAAATACCAAATGCCACTAGCTTTCGAACACCAGTTACACTGGTACGACTCCTCCCTCAAATCGGTATCGGATTCCGCCCAGATTATCTATTCTTATAACGACGTCCTTCATGGGTTTTCGACCCGTTTGACGCCGGATGAAGCCCAACGCCTCCAATCCCAGCCGGGAATCCTCGCCGTGCTACCGGAGTTGAGATATGAGCTTCACACCACACGATCTCCTCAGTTTCTTGGACTTGACAGAAATGCCGATTTCTACCCGGAATCTAACTCTGCGTCGGAAGTCATCATCGGCGTTTTGGACACCGGGGTTTGGCCGGAGAGTAAGAGCTTTGATGATACCGGGTTAGGACCGATCCCGAGTAGCTGGAAAGGCGAGTGCGAAACCGGGACGAATTTCACAGCCGCGAATTGCAACCGGAAGTTGATCGGAGCTAGATACTTCTCCAGAGGCTACGAGGCCACGCTCGGCCCGATTGACGAAACGAAAGAATCGAAATCTCCGAGAGACGACGACGGACACGGAACCCACACTTCCACTACCGCAGCGGGATCGGTGGTGGAAAACGCTAGCCTATTCGGGTACGCACCCGGCACGGCCCGAGGCATGGCGGCGCGTGCGAGGATTGCAGCCTATAAAGTCTGTTGGGCTGGCGGATGTTTCAGTTCGGATATCTTAGCAGCTATTGAGAAAGCCGTAGAAGACAATGTTAACGTTCTTTCGATGTCCCTCGGCGGCGGAACTTCCGATTATTACAAAGACAGCGTGGCGTCCGGAGCTTTCGCCGCTATGGAGAAAGGAATCCTCGTTTCGTGCTCCGCCGGTAATGCCGGTCCCGGTCCGTCAAGTTTATCAAATGTCTCTCCCTGGATCACGACCGTTGGTGCCGGGACACTAGATCGTGATTTCCCAGCATTTGTCAGTCTCGGCGACGGTAAGAATTTCTCCGGTGTATCGCTCTATCGCGGAAAATCATTACCGACGACATTATTGCCGTTTATCTACGCCGCTAATGCGAGTAACGCTAGTAATGGAAATTTATGTATGACCGGAACTTTAATTCCCGAAAAAGTCGCCGGAAAAATCGTGTTTTGTGATCGCGGTGTGAACCCTAGGGTTCAGAAAGGAGCAGTAGTAAAAGCCGCCGGCGGAATCGGAATGGTACTAGCTAACACCGCCGCGAACGGCGAGGAACTAGTGGCGGATTCTCATCTTTTACCCGCTACGGCTGTCGGTCAAAAATCCGGCGACTATATAAGAAAATATCTGATTTCCGAATCGAATCCAACGGTCACGATTCTATTCGAAGGGACGAAATTAGGGATCGAGCCGTCCCCGGTGGTGGCAGCGTTTAGCTCAAGAGGACCGAATATGATAACTCCGCAGTTATTAAAACCTGATATAATCGCGCCAGGTGTCAACATCTTGGCGGGTTGGTCTAAAGCGGTGGGACCCAGCGGATTAGCGATGGACGATCGGCGAGTTGATTTCAACATTATTTCCGGAACTTCCATGTCGTGTCCTCACGTGAGTGGTCTAGCGGCGCTTATTAAAGGATCGCATCCCGATTGGAGTCCCGCGGCGATTAGATCGGCATTGATGACTACGGCTTATACCGTTTATAAGAATGGAGAAAAAATTCAAGATATTGCTACGGGAAAACCCTCCACGCCGTTTGATCATGGTGCCGGACACGTGGATCCGGTTGCGGCGCTTAATCCGGGGTTGGTTTATGATCTGACGGCGGAGGATTACTTGAATTTCCTCTGCGCGTTAAATTATAGTGCGGCGGAGATCAATTCTTTGGCGAGGAGAGAGTTTAGTTGTGAGGCGGGGAAGAAGTATAGTGTGAATGATCTTAATTATCCGTCTTTCGCCGTTGTATTCGACGGTTCGGGATCGGGATCGGGATCGAATGTGGCGAAGCACACGAGGACTTTAACCAATGTAGGCTCGCCAGGGACTTATAAAGTATCGATAACATCGGAGACGAAGATGGCGAAAATATCAGTCGAGCCGGAGTCATTGAGTTTCACGAAATCGGGGGAGAAGAAGTCGTATACGGTGACGTTCACGGCGGCGAGTGGTGGGTCGGAGATGATGGGTGGGGTAGGATTTGGTCGAATTGAATGGTCGGATGGGAAATACGTGGTGGGAAGTCCGGTTTCTTTTAGTTGGTGA 2274 50.84 MLHPFWVFPFLFFFGPSLAIEDMKTYIVHMAKYQMPLAFEHQLHWYDSSLKSVSDSAQIIYSYNDVLHGFSTRLTPDEAQRLQSQPGILAVLPELRYELHTTRSPQFLGLDRNADFYPESNSASEVIIGVLDTGVWPESKSFDDTGLGPIPSSWKGECETGTNFTAANCNRKLIGARYFSRGYEATLGPIDETKESKSPRDDDGHGTHTSTTAAGSVVENASLFGYAPGTARGMAARARIAAYKVCWAGGCFSSDILAAIEKAVEDNVNVLSMSLGGGTSDYYKDSVASGAFAAMEKGILVSCSAGNAGPGPSSLSNVSPWITTVGAGTLDRDFPAFVSLGDGKNFSGVSLYRGKSLPTTLLPFIYAANASNASNGNLCMTGTLIPEKVAGKIVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPATAVGQKSGDYIRKYLISESNPTVTILFEGTKLGIEPSPVVAAFSSRGPNMITPQLLKPDIIAPGVNILAGWSKAVGPSGLAMDDRRVDFNIISGTSMSCPHVSGLAALIKGSHPDWSPAAIRSALMTTAYTVYKNGEKIQDIATGKPSTPFDHGAGHVDPVAALNPGLVYDLTAEDYLNFLCALNYSAAEINSLARREFSCEAGKKYSVNDLNYPSFAVVFDGSGSGSGSNVAKHTRTLTNVGSPGTYKVSITSETKMAKISVEPESLSFTKSGEKKSYTVTFTAASGGSEMMGGVGFGRIEWSDGKYVVGSPVSFSW 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32310785 32313058 - evm.model.ptg000014l.865 HCH14g0343 558246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0343 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 100 IPR037045 -
HCH14g0343 757 FunFam subtilisin-like protease SBT1.5 331 471 - -
HCH14g0343 757 FunFam Subtilisin-like protease SBT1.5 125 346 - -
HCH14g0343 757 Pfam Subtilase family 124 573 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH14g0343 757 Gene3D Peptidase S8/S53 domain 126 616 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH14g0343 757 ProSiteProfiles Serine proteases, subtilase domain profile. 96 603 - -
HCH14g0343 757 Gene3D - 331 472 - -
HCH14g0343 757 Pfam Peptidase inhibitor I9 25 100 IPR010259 -
HCH14g0343 757 Pfam Fibronectin type-III domain 650 754 IPR041469 -
HCH14g0343 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
HCH14g0343 757 MobiDBLite consensus disorder prediction 189 212 - -
HCH14g0343 757 CDD PA_subtilisin_like 338 464 - -
HCH14g0343 757 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
HCH14g0343 757 PRINTS Subtilisin serine protease family (S8) signature 123 142 IPR015500 -
HCH14g0343 757 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
HCH14g0343 757 MobiDBLite consensus disorder prediction 189 207 - -
HCH14g0343 757 Pfam PA domain 378 449 IPR003137 -
HCH14g0343 757 CDD Peptidases_S8_3 97 569 IPR034197 -
HCH14g0343 757 FunFam Subtilisin-like protease SBT1.9 16 100 - -
HCH14g0343 757 Gene3D - 620 756 - -
HCH14g0343 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 753 IPR045051 -
HCH14g0343 757 SUPERFAMILY Subtilisin-like 99 607 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1168 HCH-Chr11:43856094 HCH14g0343 HCH-Chr14:32310785 1.60E-229 dispersed
HCH14g0343 HCH-Chr14:32310785 HCH8g0597 HCH-Chr8:42753632 1.10E-238 dispersed
HCH14g0343 HCH-Chr14:32310785 HCH4g0597 HCH-Chr4:3955902 3.20E-299 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0343 - - - 0.0